Lodderomyces orthopsilosis: CORT_0B05010
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Entry
CORT_0B05010 CDS
T02488
Name
(RefSeq) hypothetical protein
KO
K10609
cullin 4
Organism
cot
Lodderomyces orthopsilosis
Pathway
cot03420
Nucleotide excision repair
cot04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
cot00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
CORT_0B05010
09124 Replication and repair
03420 Nucleotide excision repair
CORT_0B05010
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cot04121
]
CORT_0B05010
03400 DNA repair and recombination proteins [BR:
cot03400
]
CORT_0B05010
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cot04147
]
CORT_0B05010
Ubiquitin system [BR:
cot04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Cullin
CORT_0B05010
DNA repair and recombination proteins [BR:
cot03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
CORT_0B05010
TCR (transcription coupled repair) factors
Cul4-CSA complex
CORT_0B05010
Exosome [BR:
cot04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
CORT_0B05010
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cullin
Cullin_AB
Cullin_Nedd8
Sigma54_AID
DUF5101
PerB
Motif
Other DBs
NCBI-GeneID:
14538826
NCBI-ProteinID:
XP_003867646
UniProt:
H8WZL4
LinkDB
All DBs
Position
2:complement(1086632..1089193)
Genome browser
AA seq
853 aa
AA seq
DB search
MPKTIPQILDLGSTSSLPSVTSTECSSRMASTSSISLAGDSTSSKIRTSHLLQHRPKKRK
RTPIIQNEDNNNSLPESTRRQLEASKQILYNVIDRILDGQTLGHSLSFLYGRVEAICRYK
HNEQTALADYLFDKLNTFFNRKIETPISKASVPFETEDTRELSAERFALCLCEHVLENWK
IWNTIIMKLSQVFGYLEKNYLRPHHSRKSIIKYGETKFAEVYFANKSNESEIEILLAAVA
SGETVQTHSYARIVLDSYARVTDLYYRAKYWKSVDEGLINRSREAFKNMTALFQRFESKN
IQSESSAQSPELIIMDQFSPRIEREYIGWFCNEKFQKAFELKRRFMIIDEECAFYSGCGI
NKQTVDKVAAKLMFFLIFRDDFNDLVLKGFEELIDSPKEMQLLNKMCLEIEKGLVLNGKE
KLVFTWKQYCEKKFQDAITTYQSNLSESQLYPNALIYLSIVSGRLESKIHFYYNDDTDFN
SILKSSLGVAVNKPGNNTYIIQQMCKLCDLYFKSKLEIVVGSLDSLWELIKHPYFVLSNQ
VDFLTAYKKDLSRRLLLGKTSSLKEEHQLAKFFGIFGHGSEVSGNIEDMFEDLKASEEIY
SKLVKNPYFEFTPVVLEKTTWSDIPSQDLSSVQLPIEFANVLKNFVQSFCKSDERNGKKQ
LDWSNYKLHQLTIAGHFNSGEISISANMLQAMIILLFNESDEYTFEQLIDKTKMDAPLLQ
AVLNTMVTGKCKILKQQGNKIKFNNSFKDKSKTIRLPIIKESTAASMPSRGTSIDKEVVE
VIERNRNEEFKSVVVRIMKQAKSLSMTNLLNQSIEILQRRRPVSVIDLKSAIERLITDEF
LKRKNRDTIEYIS
NT seq
2562 nt
NT seq
+upstream
nt +downstream
nt
atgccaaagactatcccacagatactagacctaggatcaacatcatcattgccctcagta
acatcaactgaatgctcgtcacgcatggcttcaacgtcatccatttccctagctggtgat
tccacatcatccaaaattagaactagtcatttgttgcaacacagacccaagaagaggaaa
agaacaccaatcatacaaaatgaagataataataatagtctaccagagtctacacgacgt
caattagaggcaagtaagcaaatcttgtataatgtcattgatcgaatattagatggccaa
acattgggtcactctttgtcatttctttatggtcgagtcgaagctatttgtcgatacaag
cataatgaacaaacagcattagctgattatttgtttgacaagcttaacacatttttcaac
agaaagattgaaacaccaatttcaaaggccagtgtcccttttgaaacagaggacactcgt
gaattgagcgccgagaggtttgctttatgtttatgcgagcatgttctcgaaaattggaaa
atttggaacactattataatgaaattgagccaagtgtttggttatctcgaaaagaactat
ttgcgtccacaccactcacgaaagtctattatcaaatacggtgagacaaaatttgcagaa
gtgtattttgcaaacaagtcgaatgaatctgaaattgaaatactactagcagctgttgct
tctggtgagactgtacagacgcacagctatgcgcgtatagtactagacctgtacgccagg
gttactgacttgtattatcgtgcaaagtattggaaatccgtagatgagggacttattaat
cgatcacgagaagctttcaaaaatatgactgctttatttcagcgctttgaatccaaaaat
atacagctggagtcgtcggctcagtctccagaacttataataatggaccaattttcacca
cgtattgaacgtgaatacattgggtggttttgtaatgagaagtttcaaaaagcctttgaa
ctaaaaaggagatttatgattatcgatgaagaatgtgccttttactcaggctgcggcata
aataaacaaactgtcgataaagtagcggctaaattgatgtttttcttaatctttcgggat
gactttaatgacttggttttgaaaggttttgaagaattgattgactcaccaaaagaaatg
caattattaaataagatgtgccttgaaatcgagaagggtctagtgcttaatggaaaggag
aaattggtgtttacttggaagcagtattgtgaaaagaagtttcaagatgccattacaacc
tatcaatctaacttgagtgagctgcaattatatccgaacgcactaatatatttgagtatt
gtttctggaaggcttgagctgaagattcacttttattacaatgatgatactgatttcaat
ctgattttaaaatcgtcgttgggagtggctgtgaataaaccgggtaataatacttatatc
atacagcagatgtgcaaactatgtgatttatattttaaatccaaactagagattgtggtt
ggttccttggatagtttgtgggaattaatcaaacatccttatttcgtattatcaaaccag
gttgattttttgacagcttacaagaaggatttatctcgaagattactcttgggtaaaact
tctagtttaaaagaggagcatcaattggcgaagtttttcgggatttttggccatggatcc
gaagtttctggcaatatagaagatatgtttgaagacttgaaggcgtccgaagaaatttat
tctaagttggtaaagaatccttactttgaatttaccccagtagttttggaaaaaacaaca
tggtcagatatcccaagtcaagatttgtcgtcggttcaattaccgattgaatttgccaat
gtgttgaagaattttgttcaatctttctgtaaatcagatgaaagaaacggcaagaagcaa
ttggattggtccaattacaaattacaccaattgactattgccgggcattttaatagtggg
gaaatatccataagtgccaatatgttacaagcaatgattatccttttgttcaatgaatct
gatgagtatacatttgaacaactcattgataagactaaaatggatgcgccacttttacaa
gcagttctaaatacaatggttaccggaaaatgcaaaatattgaaacaacaaggcaataag
atcaagtttaataatagttttaaagacaagtctaagacaattagattgcctataattaag
gaatcgacagcagcttcgatgcccagtagaggaacatcaattgataaagaagttgttgaa
gttattgaaaggaatagaaatgaagaattcaaatcggtggtcgtacgaatcatgaaacaa
gcaaaatcactatcaatgacaaatcttttgaatcaaagtattgagattttacaaagacgt
cgacctgtatcagtaatcgatcttaaatctgctattgaacgtttgattactgatgaattt
cttaaaagaaaaaatagggatacaattgaatacatttcttga
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