Candida orthopsilosis: CORT_0B05360
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Entry
CORT_0B05360 CDS
T02488
Name
(RefSeq) Hfm1 protein
KO
K15271
ATP-dependent DNA helicase HFM1/MER3 [EC:
5.6.2.4
]
Organism
cot
Candida orthopsilosis
Brite
KEGG Orthology (KO) [BR:
cot00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cot03036
]
CORT_0B05360
Enzymes [BR:
cot01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CORT_0B05360
Chromosome and associated proteins [BR:
cot03036
]
Eukaryotic type
Meiosis-specific proteins
Others
CORT_0B05360
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Sec63
Helicase_C
ResIII
SNRNP200_wHTH
AAA_19
HTH_68
Motif
Other DBs
NCBI-GeneID:
14538919
NCBI-ProteinID:
XP_003867681
UniProt:
H8WZP9
LinkDB
All DBs
Position
2:join(1147178..1147223,1147264..1150613)
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AA seq
1131 aa
AA seq
DB search
MSFLNNLNAFLESDDKHILISIDLVNEPVARYDPPFVPSSPSQEEKRLPFILKDLNSFRY
NESLDANVSPVRSSSVNQSYDLINSNHDYLRTHDSHLNSTFSSVVPKLKVNVLSSSQRCV
FPFDKFNEMQSKCFNVVYGTTKNCVLSSPTGSGKTVVFELAILRANETLYDCKVLYLAPT
RALCSERKDDWSKKFAPLGITVGMLTGDTSYRETESVRNSRVIISTPEKWDMITRKWNDY
KKLFSLVKLLLVDEVHVLKEPRGATLEVVMTRMKRICVGLRILAISATVANAHDISTWLD
AETLIFGEEYRAVKLQKIVYGYKPNNENDFSFDNQLNSKLVEVIEKHSTGKPVLIFCATR
NSCQFTAKFLAEKICAKGVVLKLKDRELANLMKTGVGYHHAGLTYADRKLIEAAFLNGDL
GYLCCTSTLAVGINLPAYLVIIKGTRCWCESTFQEYSETDILQMIGRAGRPQFENEGVSI
IMTNSKLKLKYERLIMGTEKVESSLHLNFSENLLAEIAVGNISSIDDALSWLKTTYFYVR
FLINPSYYDIPKPTTTEENLLRFCMNQTDKLIKEDLIHDFKCTKFGLSMTMHYIKFDTMK
VILNASGQLNISELFDILAKAAEFSEVKIKHQEKRLYKELNKSPLMRYPSESKVSTIIQY
ELGGLEFPNYNGAQKLQSSFLGDKFFVFKHVSRILRAMMDVFVEKKNAKSLVNSGYVMRS
ITAKGWEGSPNELKQLDTVGIKSIKKLVNHNVLTLMDAKTLSQTQIEQFLGLKVGAGAKL
KRALSSIPKIDVDAHLNGSEVQINIRIEPITKIFKNETLYLQVISFSGDRLVDFRRASLK
NFTDGGFVVPYCGQMVEIEASVMCGVFRKVSVGESKKPIEDVDPNFEFSSSLTSLSDIFA
IQHVQKDASQDKCKNACLIEGVEEENNSGTSHLLSSSSTKAIVDAAPLVAIRKCSKKKVR
RKRSIFDVHSDDSDDAVSNNIAERKKPKDNSNKAPVKTDTLLRESGERVGKESLRQKETK
LESNERNREGRSEVHAENQVKSDCTSWDTTELSDGMRATEGLNKGSSNPKIEEEAPTNSK
KESISFHSVSTRSTAKHFDVHLDKDGSQITQVDDDVLEEFQQFFGSDVLVE
NT seq
3396 nt
NT seq
+upstream
nt +downstream
nt
atgtcattcttgaacaatttaaatgcgtttctagagtcggatgataaacatatactaatc
agtattgatttggtgaatgagcctgtggcaagatatgatcctccatttgtcccttcatca
ccttctcaagaagaaaagagattgccctttatcctcaaagacttgaatctgttcaggtat
aatgaaagtctcgatgccaatgtgtctcccgttcgttcactgtcagttaatcagagctac
gacttgatcaatagcaatcatgactaccttcgtacgcatgactcacatctaaattccaca
ttctcatctgtggttccaaaattgaaggttaatgttttgctgctgctgcagagatgcgta
ttcccgtttgacaaatttaacgaaatgcaatcaaagtgctttaatgttgtatacggaacc
acaaagaattgtgttctcagttctcccacaggttcaggtaaaactgtggtgtttgaattg
gcaatattacgtgcgaatgaaaccttatacgactgcaaggtgctttacctagctccaaca
agagccttgtgtagtgaacgaaaagatgactggtccaaaaagtttgccccacttggcata
acagttggtatgttgacaggtgacacatcatatagagagacagaaagcgtacgcaactca
agagtcattatttcaaccccagaaaagtgggacatgattaccagaaaatggaacgactac
aaaaagttgtttagcttggtcaaattgcttcttgtggatgaggtacacgtacttaaggag
ccacgtggtgcaactttggaggtggtcatgactcgaatgaagagaatctgtgtggggttg
agaatcttggcaatatctgccacagttgcaaatgctcatgatatttcaacttggctcgat
gctgaaacactaatttttggtgaagaatatcgtgcagttaagttgcaaaaaattgtttac
ggttacaaacccaacaatgagaatgacttctctttcgataatcagttgaattcaaagttg
gttgaggttatagagaagcattcaacaggaaagcctgtattgattttctgtgcaactaga
aatagttgccagtttacagcaaagttcttagctgagaagatatgtgcaaagggagttgtt
ttaaaactaaaggatagagaattagccaatttaatgaagactggtgttggatatcaccat
gcgggattaacttatgctgatcgaaaactaattgaggctgctttcttgaatggcgacttg
gggtatctatgttgtacttcaacgcttgctgtgggtatcaatctacctgcatatttagtt
attatcaaaggcacaaggtgctggtgtgaaagcacatttcaggagtattcagagacagac
atcttgcaaatgattggtagggcagggagaccacaatttgaaaatgaaggggtatctatt
atcatgactaacagcaagctaaagctaaaatatgaacggttgattatgggaaccgaaaag
gtcgagagttcgttgcatttgaacttttccgagaatcttttagcagaaatcgctgtcggt
aatattagctcaattgatgacgcgctcagttggttaaaaaccacatacttttacgttcgg
tttctcatcaatcctctgtattatgatattcctaaaccaactacaacagaagaaaacttg
cttaggttttgtatgaaccaaacagataagttaattaaagaggatctaattcatgatttc
aagtgtacaaagtttggactatccatgactatgcattatatcaaatttgatactatgaaa
gtgattttaaatgctagtgggcagcttaatatatccgaattgttcgatattcttgccaag
gctgcagagttcagtgaagtcaagatcaagcatcaagaaaagagattgtataaggagcta
aacaagtcccccttgatgagatatccatcagaatcaaaagtgagcaccataattcagtat
gaacttggtggtttggaatttccaaactacaacggagctcaaaagttgcaatcaagtttt
ttaggtgacaagttttttgtgttcaaacatgtatcgcggatactcagggcaatgatggac
gtattcgttgagaaaaagaatgcaaagtctttggtaaatctgggatatgtcatgcgttct
attacagctaaaggatgggaaggatcacctaatgagcttaaacagcttgatactgttggt
atcaagagtatcaagaagttggtgaaccataatgtgcttacgttgatggacgctaaaaca
ttgtcgcaaacacaaattgagcaatttttgggcctaaaggttggagctggtgctaaattg
aaaagggcattgtcatcgatacctaagattgatgttgatgcccatttgaatggatcggag
gttcagataaatataagaattgaacccatcacgaaaatcttcaaaaatgaaactctttat
ttgcaggtgataagctttagtggtgatagacttgtcgactttagaagggcttctttgaag
aactttactgatggtggttttgttgttccatattgtggtcagatggttgaaattgaggcc
agtgtcatgtgtggcgtttttcgaaaagtcagtgttggggaatccaaaaagcccatagag
gacgttgacccaaattttgaattctcttcatccttaacttcattgagcgatatatttgcc
attcagcatgtacagaaagacgcttcccaagacaaatgcaagaacgcatgtttgattgaa
ggtgtagaggaagaaaacaattctggtacttcccatttgctttctagttcgtctaccaag
gcaattgtggatgcggctcctctcgttgcgattcgaaaatgctcaaagaagaaggttagg
agaaaaagatcgatctttgatgttcattctgatgactcagatgatgcagtttcaaacaac
atcgccgagaggaaaaagccgaaagataacctgaataaagcaccagtcaagactgacacc
ttgttgcgtgaaagtggtgagcgcgttggcaaggagtctttgcgtcagaaagaaacaaag
ctagagtcaaatgagaggaacagagaaggcagaagtgaagttcatgctgaaaatcaagtc
aaaagcgattgtacgagctgggacaccactgaactactggatggtatgagggcaactgaa
ggcctcaataagggaagttcaaatccgaagattgaggaagaagcccctacaaattctaaa
aaggaatcaatttcattccacagtgtaagtactagaagcactgccaagcattttgatgta
catcttgataaagatggctcacaaattactcaggtagatgatgatgtcttggaagaattt
cagcagttttttgggagcgacgtgctcgtcgaataa
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