Candida orthopsilosis: CORT_0B05960
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Entry
CORT_0B05960 CDS
T02488
Name
(RefSeq) Smd2 core Sm protein
KO
K11096
small nuclear ribonucleoprotein D2
Organism
cot
Candida orthopsilosis
Pathway
cot03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cot00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
CORT_0B05960
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cot03041
]
CORT_0B05960
03032 DNA replication proteins [BR:
cot03032
]
CORT_0B05960
Spliceosome [BR:
cot03041
]
Complex A
U1 snRNP components
Sm proteins
CORT_0B05960
U2 snRNP components
CORT_0B05960
Complex B
U1 snRNP components
CORT_0B05960
U4/U6.U5 tri-snRNP components
CORT_0B05960
Complex C
U2 snRNP components
CORT_0B05960
DNA replication proteins [BR:
cot03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
CORT_0B05960
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Hfq
Tospov_NS-S_N
Motif
Other DBs
NCBI-GeneID:
14538619
NCBI-ProteinID:
XP_003867742
UniProt:
H8WZW0
LinkDB
All DBs
Position
2:complement(join(1273568..1273898,1273960..1273964))
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AA seq
111 aa
AA seq
DB search
MSEFIDRPRSELTEFELAKLEEFEFLHGPMSLINQAQKQNTPVIISCRNNHKLVGKIRAF
DRHCNLVLENVKELWTETVKNEFNQTKSVSRERFISKMFLRGDSVIIILKA
NT seq
336 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaattcatagaccgtccacgatcagaacttaccgaattcgaactcgccaaactt
gaagagtttgaattcttacatggacccatgtcacttataaaccaagcccagaaacaaaac
acacccgtgataatatcgtgtcgaaataaccataaactagttggtaaaattcgagctttt
gataggcattgtaatttagtattggaaaatgttaaagaattatggactgagacggtgaag
aatgaattcaatcagacgaagagtgtgtcgagagagaggtttattagtaagatgttttta
agaggagattcagttattataatattgaaagcttga
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