Candida orthopsilosis: CORT_0B08010
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Entry
CORT_0B08010 CDS
T02488
Name
(RefSeq) Rna15 protein
KO
K14407
cleavage stimulation factor subunit 2
Organism
cot
Candida orthopsilosis
Pathway
cot03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cot00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
CORT_0B08010
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cot03019
]
CORT_0B08010
Messenger RNA biogenesis [BR:
cot03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
CORT_0B08010
U7-dependent histone pre-mRNA processing factors
CORT_0B08010
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CSTF2_hinge
RRM_1
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
14538419
NCBI-ProteinID:
XP_003867942
UniProt:
H8X1V0
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All DBs
Position
2:1675386..1676117
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AA seq
243 aa
AA seq
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MDNRSTCVSIGKFPFDYTEEQVLEIARSVGPVLDIKLLFDELTGKSKGYAIVNYGDVETA
GSAVRNLNYTSLPNGRFLKCAIVNDYEMIGDEDSAVKLPPLPLGIQIHPNQNASQVISSI
LSNIDSNSALQILKEMKTMSQENPKGTKLLLERFPQLALAIVELGLLTNTTNHELIELTL
NKKPIELKSLSVDHVSLLQSVYKLADDQIIELDESQQEIVKRIKVEIEKGSYGEILENSI
KQG
NT seq
732 nt
NT seq
+upstream
nt +downstream
nt
atggacaacaggagcacatgcgtatcgatagggaagttcccatttgactatacagaggag
caagtgttagagatagcgaggtcagtagggccggttcttgatatcaagctattatttgat
gagttaacgggaaaatcaaaagggtatgcaattgtgaactatggagatgttgagacggca
ggctcggctgtacgaaatttgaattatacttccctacctaacgggaggtttttgaaatgt
gccattgtgaatgattatgagatgattggagatgaagattctgctgtcaagttaccacca
ttaccattgggaattcaaatacacccaaaccagaatgcatcgcaagtgatatcaagtata
ctatcgaacatcgattctaattcagcgcttcagatcttgaaggagatgaaaaccatgagc
caggagaatcccaaaggtaccaaacttcttcttgagaggttcccacaattagctttggcc
atagttgaattaggtttattaactaataccaccaaccacgagcttatagagttgacatta
aacaagaagccaatagaattgaagagcttgtcagtcgatcatgtcagtctactacaatca
gtatataaattggccgatgatcaaattattgagttggatgaaagtcaacaggaaattgtg
aaacgaatcaaagttgaaattgagaaaggatcttatggtgagattttggagaacagtatc
aaacaaggttga
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