Lodderomyces orthopsilosis: CORT_0B08890
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Entry
CORT_0B08890 CDS
T02488
Name
(RefSeq) Spt20 transcription factor
KO
K11361
transcription factor SPT20
Organism
cot
Lodderomyces orthopsilosis
Brite
KEGG Orthology (KO) [BR:
cot00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cot03021
]
CORT_0B08890
03036 Chromosome and associated proteins [BR:
cot03036
]
CORT_0B08890
Transcription machinery [BR:
cot03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
CORT_0B08890
Chromosome and associated proteins [BR:
cot03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
CORT_0B08890
SLIK complex
CORT_0B08890
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spt20_SEP
TFIIA
Motif
Other DBs
NCBI-GeneID:
14539067
NCBI-ProteinID:
XP_003868028
UniProt:
H8X081
LinkDB
All DBs
Position
2:complement(1843417..1845660)
Genome browser
AA seq
747 aa
AA seq
DB search
MANFELSNGGGKTVAPNRSPLNLNQNQHSESNLPLKTQVLQQKQQQQQQQQQQQQQQQQQ
QQSLKQKINIRNYHFASTTEEILRKYSKYPASLSLHIFDNHYRFNNSQDSQIIPKTSPMI
KSFMNHVLKEEIPVELSELLKDFSIKSYDGCLILQVYDHRNMIETSTFRPNSSPSKDTKS
SPIIVSKPRTYRILLRPSPLSLYYDLLYHTDSALTKFTDTLSLQMESEILALTNRELDLS
VKVNPYQYDYLKPDVEDASEIGKGEVNFSHRTGINVFPRKIHQDEMVLHKSSEYEELMLL
LSNNNRRFEDTQEKKLVIVPPAMPSTSTTSSITTPSTKSISKESSVGADSKGKKSDKIPS
SSTIPTTVAISQNPVRTSGQFMRLRLIEEIRKKREIEKNQQEAKIQAQANSVQSDMVPQS
GAILAEPSVASANNANQPLVETQIGDKRQQSMLSQAGKRARKDMKQNQLSAPIASPAGTG
GTVGSTGSQIPFMPSNSNSQISSINNTPLMANPVPPSQPNASQMPTPQQIPMGTPNLGQG
VLPQQNVPRPPSSMVPHNIQPSPQPHLQHAPNQPSLQQQQHQQIFQGSLTPEEQQIFKQI
QSKMNALAMMSQTGVAPNGQQLTPQHKQQAMQQVKVLQQQLLQKFPVYFQRLRQFQLYQK
QKQLQQQRAGVAAGTIGDGGGANMNNQFNNNLLQPQHQTQQQHFTNSLTQGVAPPMANPQ
PVNAVSSAQSSALEPKKKRVYKKKAAK
NT seq
2244 nt
NT seq
+upstream
nt +downstream
nt
atggccaattttgaactctcaaatggtggtggtaaaactgtagctcccaataggagtccc
cttaatttgaatcaaaatcaacatctggagctgaacctacctttaaaaactcaggtctta
caacagaaacaacaacaacagcagcagcagcaacaacaacaacaacaacaacaacaacaa
caacagctgttaaaacaaaagatcaacatccggaattatcactttgcatccactactgaa
gaaatactacggaaatattcaaaatatccagcatcattgagtttgcatatcttcgacaac
cactaccgattcaataattcgcaagattctcaaattatacccaaaacatctccaatgatt
aaaagcttcatgaaccatgtgttgaaggaagagattccagtggaattgagcgaattattg
aaggacttctcgatcaaatcctatgatggttgtctcattttgcaggtctatgatcatcga
aatatgattgaaacatctacattcagaccaaattcatctccatcgaaggatacaaaaagt
tccccaattattgtttcgaaaccaagaacctataggatactactcaggccttcgccacta
tcgctttactatgatttattatatcataccgattcagcattgacaaaatttacagacaca
ttgtcattgcaaatggagtccgaaattttggctttgacaaacagggagttggatctttca
gtgaaagttaatccttatcagtatgattacttgaagcctgacgtggaggacgcatctgaa
attggtaaaggagaagtcaacttttctcacagaacaggcatcaacgtttttcctcgcaaa
attcatcaagatgaaatggttttgcataaatcatccgaatacgaagagttaatgttattg
ttgtcgaacaacaatagacgttttgaggacacacaagagaagaagttggtgattgtaccc
ccagcaatgccaagcacctccaccactctgtccatcacaactccgtcaaccaaatctata
agcaaagaaagctctgttggagctgactcaaagggtaaaaagagtgataaaattccaagc
tcatctaccatccctacgaccgttgcaatatctcagaatcccgtgagaacctctggtcag
tttatgcgtttgagattgattgaagaaatacggaaaaagagggagattgaaaagaaccaa
caagaggcgaaaatacaggcgcaagcaaattctgtgcaaagcgatatggtgccacagtct
ggtgctattcttgcagagccttcggttgcatcggcaaacaatgcaaaccagcctcttgtt
gaaactcaaattggtgacaaaaggcaacaatccatgttatcccaagccggcaaacgtgct
aggaaggatatgaaacaaaatcagttatctgcccctattgcgtctcctgctggtacaggt
ggcactgttggatctacaggatctcagataccttttatgccctcaaactccaattcgcaa
atactgtcgataaataatacccccttaatggcaaacccagttccgccgtcgcaaccgaat
gcaagccaaatgccgaccccgcaacaaataccaatggggacgccaaacttgggacagggt
gtcttaccacaacaaaatgtacctcggccgccttcctctatggtgcctcacaatatacag
ccatcaccccaaccacatttgcaacacgcgccgaaccagccttctttgcaacaacagcaa
catcaacaaatttttcagggttcattgaccccggaagagcagcaaatatttaagcaaatt
caactgaaaatgaatgcattggcaatgatgagccaaacaggtgttgcccccaatggtcag
caattgacccctcaacataaacagcaggcaatgcagcaggttaaggttttgcaacaacaa
ttattgcaaaaattccctgtgtactttcaaagattgaggcaatttcaactttaccagaag
cagaagcaattacagcagcaacgagcaggagtggccgccggaaccattggtgatggtggt
ggcgctaatatgaataatcagttcaataacaacttactacagccccagcatcagactcag
caacagcatttcacgaatctgctaacacaaggtgttgcaccacccatggcaaatcctcaa
ccggtaaatgccgtctcatccgctcagtccagtgcactagagcctaaaaagaaaagagtg
tataagaagaaagcagcaaaatga
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