Candida orthopsilosis: CORT_0B09840
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Entry
CORT_0B09840 CDS
T02488
Name
(RefSeq) Rli1 protein
KO
K06174
ATP-binding cassette, sub-family E, member 1
Organism
cot
Candida orthopsilosis
Brite
KEGG Orthology (KO) [BR:
cot00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cot03009
]
CORT_0B09840
Ribosome biogenesis [BR:
cot03009
]
Eukaryotic type
Pre-40S particles
Other pre-40S particles
CORT_0B09840
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
Fer4_RLI
SMC_N
AAA_21
Fer4
Fer4_6
AAA
AAA_22
Fer4_21
VapE-like_dom
LdpA_Fe-S-bd
AAA_15
nSTAND3
Fer4_2
RNA_helicase
Rad17
Fer4_10
Fer4_16
Fer4_9
NB-ARC
Fer4_7
AAA_23
AAA_30
Fer4_4
TsaE
SRP54
Fer4_3
Fer4_8
AAA_25
HflK_N
AAA_13
Fer4_17
Motif
Other DBs
NCBI-GeneID:
14539096
NCBI-ProteinID:
XP_003868123
UniProt:
H8X0H6
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All DBs
Position
2:2056518..2058380
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AA seq
620 aa
AA seq
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MSSKGKGKNNKGETSSKNERIAIISTDRCKPKKCKQECRKSCPVVKTGKLCIEVTPASKI
AFISETLCIGCGICVKKCPFDAITIINLPTNLDAETTHRYSANSFKLHRLPTPRPGQVLG
LVGTNGIGKSTALKILAGKQKPNLGRYDDPPDWEEILRNFRGSELQNYFTKILEDDIKAI
IKPQYVDNIPRALAKSKVKAVGAILESKNERPDAFDYVLKVLELKHVLERDVENLSGGEL
QRFALGITCVQEANVYMFDEPSSYLDVKQRLRAAEIIRSLLSATTYIICVEHDLSVLDYL
SDFICILYGAPSVYGVVTLPSSVREGINIFLDGHIPTENMRFRTESLQFRLADAADDLIL
DKSNSLEYPTMTKTQGDFKLEVEAGDFTNSEILVMMGENGTGKTTFCKLLAGAIAPDGGK
EIPKLNVSMKPQKIAPKFTGTVRQLFFKKIRASFLHPQFQTDVVKPLKIEDIIDQEVQTL
SGGELQRVAIVLALGIPADLYLIDEPSAYLDSEQRIICSKVIRRFILHAKKTAFIVEHDF
IMATYLADRVIVFEGQPSRHAYARSPESLLTGCNRFLKNLNVTFRRDPNSYRPRINKLDS
QMDKEQKLSGNYFFLENTEL
NT seq
1863 nt
NT seq
+upstream
nt +downstream
nt
atgagttccaagggtaaaggcaagaacaataaaggagaaaccagctcaaaaaatgaaaga
attgctatcatatctaccgacaggtgtaaaccaaagaagtgtaaacaagagtgtaggaaa
agttgtccagtggtaaagacaggaaaattatgtatcgaagttacaccagcatctaagatt
gcatttatatcagaaaccttgtgcattggatgtggtatctgtgttaagaaatgtcccttt
gatgcaattacaattatcaacttaccaaccaacttggatgccgaaactacccacagatac
tcagcaaattccttcaaattgcacaggttgcctacaccaaggccaggccaggtcttgggg
ttggtaggtactaatggtattggtaaatccacggcgttgaaaatcttggccggtaaacaa
aagcctaatttgggtagatacgatgatccaccagattgggaagaaattttaagaaacttt
agagggtccgaattgcaaaactatttcacaaagatattggaagatgatatcaaagccatt
atcaagccacagtatgttgataacattcctcgtgcgctagccaaatcaaaagttaaagca
gttggtgctattttggaatcaaaaaatgaaagaccagacgcgtttgattatgttttgaaa
gtattggagttgaagcatgttttggagagagatgtcgaaaatttgtcaggtggtgaacta
caaagatttgctttgggtatcacgtgcgttcaagaagccaatgtctatatgtttgacgaa
ccgtcttcttacttggatgtcaagcaaagattgagagcggcggaaattatcagatcactt
ttatctgccacaacatatattatttgtgttgagcacgatttgtcagttttggattatttg
tcagattttatttgtattctttatggagctccgtctgtttatggtgttgttactttacct
tcctccgtaagggaaggtataaatatcttcttagatggtcatatacctactgaaaacatg
aggttcagaactgagtctttgcaattcagattagcagatgcagcagatgacttaatcttg
gataaatcaaactcattggaatacccaactatgaccaagacgcaaggtgatttcaaattg
gaagttgaggcaggtgatttcacaaattctgaaattttagtcatgatgggagaaaatggt
accggtaaaactacattctgtaagttgttagctggtgctatagccccagatggaggaaaa
gaaattccaaaattgaacgtttcaatgaagccgcaaaagattgcaccaaaatttacagga
actgtaagacagttgttcttcaagaagataagggcgtcttttttacaccctcaatttcaa
actgatgttgttaaaccattgaaaattgaagatataattgatcaagaggtccaaacgttg
tcaggtggtgaattgcagagagttgctatagtgttggcattgggtatacctgcagacctc
tatttgatcgatgagccatccgcttatttggattccgaacaacgtatcatttgttccaaa
gtcattagaagatttattttgcatgcaaagaagaccgccttcattgttgagcacgatttc
atcatggctacatacttggctgacagagtcattgtttttgaaggacaaccatctagacat
gcatatgcaagaagtcccgaatctttattgactggttgtaataggttcttgaaaaacttg
aatgtaaccttcagaagagatccaaactcctatagaccaagaatcaacaaattggactcc
caaatggataaggaacaaaaattgtcaggcaattactttttcttggagaataccgagttg
taa
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