Candida orthopsilosis: CORT_0B10420
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Entry
CORT_0B10420 CDS
T02488
Name
(RefSeq) Rpb7 protein
KO
K03015
DNA-directed RNA polymerase II subunit RPB7
Organism
cot
Candida orthopsilosis
Pathway
cot03020
RNA polymerase
cot03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cot00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CORT_0B10420
09124 Replication and repair
03420 Nucleotide excision repair
CORT_0B10420
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cot03021
]
CORT_0B10420
03019 Messenger RNA biogenesis [BR:
cot03019
]
CORT_0B10420
03400 DNA repair and recombination proteins [BR:
cot03400
]
CORT_0B10420
Transcription machinery [BR:
cot03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Pol II specific subunits
CORT_0B10420
Messenger RNA biogenesis [BR:
cot03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
CORT_0B10420
DNA repair and recombination proteins [BR:
cot03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
CORT_0B10420
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1
SHS2_Rpb7-N
Motif
Other DBs
NCBI-GeneID:
14538950
NCBI-ProteinID:
XP_003868179
UniProt:
H8X223
LinkDB
All DBs
Position
2:complement(2170259..2170780)
Genome browser
AA seq
173 aa
AA seq
DB search
MFFLKDLSLNLTLHPSYFGPQMDQFLRDKLLSDVEGTCTGQFGYIVCVLDSMNIDVGKGR
IIPTTGMAEFEVKYRAVVWKPFKGEVVDGVVTTVNKMGFFADVGPLSVFVSTHLIPSDMK
FNPSANPPAYSSPDENIEKGSKVRLKIVGTRTDVNEIYAIGSIKEDYLGPSPL
NT seq
522 nt
NT seq
+upstream
nt +downstream
nt
atgttttttttgaaagatttatcactaaacctaacgttgcacccttcatatttcggtcca
caaatggaccaatttttaagagataaactattaagtgatgtcgagggtacatgcacaggc
cagtttggatacattgtttgtgtgctagattctatgaatattgatgttggtaaaggaaga
ataattcccacaactggaatggccgaattcgaagtgaaataccgggctgttgtttggaaa
ccattcaagggagaagtcgtcgatggtgttgtaacaacagtgaacaaaatgggattcttt
gcagatgtgggaccattgtcagtctttgttagtacccatctaataccttcagatatgaag
ttcaatccgtccgccaatccaccagcttattccagtcctgatgaaaatatagaaaaggga
tcaaaggttaggttgaagattgtagggacaagaacagatgttaacgagatatatgcgatt
gggagtattaaggaggattatctaggaccaagtccattgtga
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