Candida orthopsilosis: CORT_0B10800
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Entry
CORT_0B10800 CDS
T02488
Name
(RefSeq) hypothetical protein
KO
K12605
CCR4-NOT transcription complex subunit 2
Organism
cot
Candida orthopsilosis
Pathway
cot03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cot00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CORT_0B10800
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cot03019
]
CORT_0B10800
Messenger RNA biogenesis [BR:
cot03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
CORT_0B10800
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
CORT_0B10800
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NOT2_3_5_C
MTaX1
Motif
Other DBs
NCBI-GeneID:
14539144
NCBI-ProteinID:
XP_003868216
UniProt:
H8X260
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All DBs
Position
2:complement(2261910..2262506)
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AA seq
198 aa
AA seq
DB search
MVTTGASIGSSQTTTLPSNDETNDLAKYGLQGLSSLVRMEQTDFTSFAIGQDISKCGLDL
SPNVNILKNLASPWSETSRSEVEPFFQIPLHLQNSQLKAHQIDPSTCDSKIQNFTDETLF
YIFYMKPRDTLQEYAARELVARNWRYHKDIQVWLTKDSNVEPVLIGQDVEKGVYIFFDPH
NWEKIRKEFVLHYSSVQA
NT seq
597 nt
NT seq
+upstream
nt +downstream
nt
atggttactacaggtgcaagtataggatctagtcaaacaacaactctaccgtcaaatgat
gagaccaatgatttagctaaatatggtttacaaggcttatcatcattggtaagaatggag
caaacggatttcacaagttttgcaattggtcaagatatcagtaaatgtggattagatcta
tcacccaatgtgaatatattgaaaaacctagcaagtccgtggctggaaacatctcgaagt
gaagttgaaccatttttccaaatcccattacatctacaaaattctcaattgaaagctcat
caaatagatccatcaacttgcgattccaagattcaaaatttcactgatgagacattgttt
tatatattttatatgaagcctagggatacgttgcaagaatatgctgctagggaattagtt
gctcgaaattggaggtatcataaagacattcaagtttggctaacaaaagatagtaatgta
gaaccagtattgattggtcaagatgtggaaaagggagtttacatattctttgatccacat
aattgggaaaagatcagaaaagagtttgtattacattatagttcagtacaggcttga
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