Candida orthopsilosis: CORT_0B11370
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Entry
CORT_0B11370 CDS
T02488
Name
(RefSeq) Rpo31 protein
KO
K03018
DNA-directed RNA polymerase III subunit RPC1 [EC:
2.7.7.6
]
Organism
cot
Candida orthopsilosis
Pathway
cot03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cot00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CORT_0B11370
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cot03021
]
CORT_0B11370
Enzymes [BR:
cot01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CORT_0B11370
Transcription machinery [BR:
cot03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
CORT_0B11370
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
VHS
Motif
Other DBs
NCBI-GeneID:
14538925
NCBI-ProteinID:
XP_003868270
UniProt:
H8X2B4
LinkDB
All DBs
Position
2:2380741..2385072
Genome browser
AA seq
1443 aa
AA seq
DB search
MGKEVVLDIAPKCIDGLDFSALSAKDIVAQSEVEIQTRDLYDLEKGRVPKEGGALDTRMG
ISSNSSECATCHGNLASCNGHFGHIRLALPVFHVGYFKAVISVLQCVCKNCGAILLEPQA
KRQFLSELRRPNIDNLKRMKILKKINDQCKKQRRCLKCNHVNGVVKKAASGAGPASLKIV
HDTFRWIGKKDTPEKTVWDEDLDLVFKRNPDLEKFAKRIQEDFNPLKTLNLFKQIIPEDC
ELLGMDASKGGRPEMYIWRYLPAPPVCIRPSVMMDAQSNEDDLTVKLTEIVWTSSMIKAG
IAKGISINNLMEQWDYLQLSVAMYINSDAANPALMSGGGGGGSKSAKPIRGFCQRLKGKQ
GRFRGNLSGKRVDFSGRTVISPDPNLKIDEVAVPDRVAKVLTYPEKCTRYNKKKLQCLII
NGPDVHPGANYVMKQNEAGKRNLRFGDRVKLAKSLQIGDVVERHIEDGDVVLFNRQPSLH
RLSILAHYAKVRPWRTFRLNECVCTPYNADFDGDEMNLHVPQTEEARAEAINLMGVKNNL
LTPKSGEPIIAATQDFITGSYLISHKDSFFDRASLVQLLSMMSDADIQFDIPPPAIMKPV
MLWTGKQVFSLLIKPNRQSKVVINLNAKNKTFHPPAKGLPSEMSPNDGFVLIRGSQILSG
LMDKSTLGDGKKHSVFYTILRDYGPQEAAAAMNRMAKLCARFLGNRGFSIGINDVTPAHE
LKQKKELMVEQAYLKCDQLIDLYNRGKLETQPGCNEEQTLEAKIGGLLSKVREEVGDVCI
RELDSLNAPLIMATCGSKGSTLNVSQMVAVVGQQIISGHRVPDGFQDRSLPHFTKNSKTP
QSKGFVRNSFFSGLSPPEFLFHAISGREGLVDTAVKTAETGYMSRRLMKSLEDLSSQYDN
TVRNSSNGIVQFTYGGDGLDPYDMEGDAKPVNFVRQWDHAYNVTYNVNDKPLLPYEINEL
ADKTLKPLVDKLAVVSDEVQNKDELVDQKDAERAFYESVREFLRDKAETLARLRESRGLQ
AFYTRVNEDDIQLDEDEAKINAVNQLLKISHRAAKEFMKQCLYKYSRAKVEPGTAVGAIG
AQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINASKTISTPIINAVLVNDDDEIA
ARVAKGRIEKTLLKDVAFYIEDVYKDNMAYLAIKVDLETIDKLQLELTIDNIAQAICKAP
KLKIAPSDVIITGKNRINVLCNVNESKSESLKSASDSLNALFFRMQTLKRVLPDICIKGL
PNIFRAVINIKDDGKKELLVEGYGLKDVMNTEGIVGTKTTTNHVLEVNEILGIEAARGSI
IREIDYTMSNHGMSVDPRHIQLLGDVMTYKGEVLGITRFGLSKMRDSVLQLASFEKTTDH
LFDAAFFMKKDKIEGVSECIILGKTMSVGTGAFKLVKSSNYDENVLKRKNTLFESCCEVS
TTA
NT seq
4332 nt
NT seq
+upstream
nt +downstream
nt
atgggtaaagaagtcgtgttggatattgcccccaaatgcattgatgggttagacttttct
gcactttcagcgaaggatatcgttgcacaatcagaagttgagattcagactagagacttg
tatgatttggagaaaggaagagtgccaaaggaaggtggagccttggataccagaatgggt
atctcttcaaactcgtcagaatgtgctacatgtcacggtaatctcgcatcatgtaatggt
cattttggccatattagactcgcgttgccagtgtttcatgtgggttatttcaaagctgtc
atatcagtgttgcaatgtgtttgcaaaaactgtggagccatattactagaaccacaagcc
aagcgtcaatttttgtcagagttgaggcgaccaaacattgataacttaaagaggatgaaa
attttaaagaaaatcaatgatcaatgtaaaaagcaacgacgctgtttaaagtgtaatcat
gttaatggtgttgtaaaaaaagcggccagtggtgcgggacctgcatcgttaaagattgta
cacgatacatttagatggattggtaagaaagatacaccagaaaaaacagtttgggatgag
gatttagatttggtgtttaaacggaaccccgatttagagaaattcgcaaagaggattcaa
gaggatttcaatccgttaaaaaccttgaacttgtttaaacagatcatccccgaagattgt
gaattgcttggaatggatgcttccaagggtggcagacccgagatgtatatatggagatat
ctaccggctccaccagtttgtatcagaccttcggttatgatggatgcgcaatcgaacgaa
gatgatcttacagtcaagcttacggaaattgtttggacttcgtcgatgattaaagcagga
attgccaaaggtatttctatcaataatttaatggagcagtgggattacttacaactttct
gtggcaatgtatatcaattccgacgccgctaatccagctttgatgtctggtggaggtggc
ggtggctcgaaatctgcaaaacctatacgtgggttctgtcagagattgaaaggtaaacag
ggccgttttagaggaaatttgtcaggtaaaagagtggatttctctggtagaactgtcatt
tcaccagatcccaacttgaaaatagatgaagtcgcagttcccgatagagtagctaaagta
ttgacatatcctgaaaaatgtaccagatataacaagaaaaagttgcagtgtttgattatt
aatggacccgatgtacatccgggagcaaactatgtaatgaagcagaatgaagcaggaaag
aggaatttgagattcggtgatcgtgttaaattggcaaaatccttacagattggtgatgtt
gttgaacgtcatattgaagatggcgatgtggtcttgttcaatcgtcaaccttcgttacac
agattatcaattttggcacattacgcgaaagtccgtccttggagaacctttagattgaac
gaatgtgtttgtacgccatataacgctgatttcgatggtgatgaaatgaacttgcatgtt
cctcaaaccgaagaggctagagctgaagcaattaatttgatgggagttaagaataatttg
ttaacgccaaagtcaggtgagcctattattgccgccactcaagatttcataactggttcg
tatttgatttcgcataaggattccttttttgatcgtgcgtcattagtacaactattgagt
atgatgtcagatgctgatattcaatttgatattccaccgccagcaataatgaaaccagtc
atgctttggactggtaagcaagtgttttcattattgatcaaaccaaacagacaaagtaaa
gttgttattaatttaaatgctaagaacaagacatttcatccacctgcgaaaggattacca
agtgagatgtccccaaacgatggtttcgttctcattaggggctctcaaatccttagtggg
ttgatggataaatcaaccttaggagatggtaagaaacactctgttttttacactatactt
cgagactatggtcctcaagaagcggcagctgcaatgaatagaatggcaaagttatgtgct
cgatttttgggtaatcgtggattctccattggtatcaacgatgtgactcctgctcacgaa
ttgaagcaaaagaaagaattgatggttgaacaagcgtatcttaaatgtgaccagttgatt
gatttgtacaatagaggcaagttagaaactcaacctggttgtaatgaggaacaaactctt
gaagccaaaattggtggtttgttgtccaaggttagagaagaagtgggtgatgtttgtatt
cgtgaattggattctttaaatgctccattgattatggctacatgtggttcaaagggttcc
acgttgaatgtttcgcagatggtggctgttgttggtcaacaaatcatttcaggtcatcgt
gttcctgatggttttcaagatcgttcattacctcatttcaccaagaactcgaaaacgcca
caatctaaagggttcgttagaaattcattctttagtggtttatcgccaccggaattcttg
ttccatgctatttcaggaagagaaggtttggttgatactgcggtgaaaacggctgagact
ggttatatgtcacgtcgtttgatgaagtcccttgaagatctttcttcgcaatacgacaac
actgtccgtaattcgtcaaatggtattgttcagtttacttacggtggtgacggtttggat
ccatatgacatggaaggtgacgcaaaaccagtaaactttgttaggcaatgggatcacgca
tataacgttacatataatgttaatgacaaaccattgttgccgtatgaaataaatgaacta
gccgacaagacattgaaaccacttgttgacaagcttgctgttgttagtgatgaagtgcaa
aataaggatgagcttgtcgatcaaaaagacgctgaaagagcattttatgaatcggtcaga
gagtttttacgtgataaggctgaaacacttgcacggttgagagaaagtagagggctacaa
gcattctacactagagtgaatgaagatgacatccaattggatgaagatgaagccaaaatc
aacgctgtgaaccaattgttgaaaatatcacacagggccgccaaggagtttatgaaacaa
tgtttgtacaaatattcgagagcgaaagtagaacctggaacagctgttggcgctattgga
gcgcaatcaattggtgaaccaggtacgcaaatgactttaaagactttccattttgctggt
gtggcatcgatgaatgtaactttgggtgttccacgtattaaggaaattatcaatgcatcc
aagactatatctacacctatcattaatgctgttttggtcaatgatgacgatgaaattgcg
gctcgtgtggcaaagggaagaattgaaaagacattgttgaaggatgtggcattctatatt
gaagatgtgtataaagacaatatggcatacttggccatcaaagtggatttggagactata
gataaattgcagttggaattgactatcgataacattgcccaagctatttgcaaggcgccc
aagttaaagattgcaccttccgatgtcatcattaccggcaagaataggataaacgtgttg
tgcaatgttaatgaatcaaagtcagagagtttgaaatcggctagtgattcactaaatgca
ctcttttttagaatgcaaacattgaagagggtgttgccagacatttgtatcaaggggtta
ccaaacatcttccgtgcagttatcaatatcaaagatgatggaaagaaggaattgcttgtt
gaggggtacggtttgaaagatgtcatgaatactgaaggtatcgttggtacaaaaactact
accaatcacgttttggaagtgaatgaaatcttaggtattgaagctgccagaggctcgatc
attagagaaattgactacacaatgagtaatcacggtatgagtgttgatcctcgtcatatt
caattgctaggagatgtcatgacgtacaaaggtgaggtcttgggtatcacaagattcggt
ctcagtaaaatgcgtgactctgtattacaattggcatcatttgagaaaaccaccgatcac
ttgtttgatgctgcattctttatgaagaaggataagattgaaggtgtttctgagtgtatt
attttgggtaagacaatgagcgttggtactggggcgttcaaattggttaaatcatccaac
tatgatgaaaatgtgttgaagagaaagaacaccttgtttgaatcttgttgtgaagtgtca
acaactgcttaa
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