KEGG   Candida orthopsilosis: CORT_0C00500
Entry
CORT_0C00500      CDS       T02488                                 
Name
(RefSeq) nuclear pore complex
  KO
K14298  mRNA export factor
Organism
cot  Candida orthopsilosis
Pathway
cot03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:cot00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    CORT_0C00500
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cot03019]
    CORT_0C00500
   03036 Chromosome and associated proteins [BR:cot03036]
    CORT_0C00500
Messenger RNA biogenesis [BR:cot03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     CORT_0C00500
Chromosome and associated proteins [BR:cot03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    CORT_0C00500
SSDB
Motif
Pfam: Beta-prop_THOC3 WD40 Beta-prop_EML_2 Beta-prop_WDR5 Beta-prop_WDR3_1st WD40_Prp19 WDR55 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_WDR3_2nd Beta-prop_RIG_2nd Beta-prop_WDR36-Utp21_2nd WD40_MABP1-WDR62_2nd Beta-prop_TEP1_2nd Beta-prop_HPS5 EIF3I ANAPC4_WD40 Beta-prop_CAF1B_HIR1 Beta-prop_WDR36-Utp21_1st WD40_Gbeta Beta-prop_WDR90_POC16_2nd WD40_RFWD3 Beta-prop_ACSF4 Beta-prop_Aladin Beta-prop_RSE1_2nd Beta-prop_WDR75_1st Beta-prop_EML Beta-prop_IFT122_1st Beta-prop_NUP159_NUP214 Beta-prop_TEP1_C Beta-prop_Vps41 Beta-prop_EIPR1 Beta-prop_WDR19_1st WD40_like RMC1_N Beta-prop_IFT140_1st WDR90_beta-prop_4th eIF2A Nucleoporin_N Tricorn_2nd Beta-prop_Nup120_160 Beta-prop_WDR35_TULP_N
Other DBs
NCBI-GeneID: 14539335
NCBI-ProteinID: XP_003868333
UniProt: H8X3F6
LinkDB
Position
3:complement(91516..92631)
AA seq 371 aa
MSFLNSSPSTSSASSTATGQELVNDILVNNPPEDSIEDISFSPQQDLLAVASWDKKVRIY
EIDPNTGNNQGKALYEHNAPVFSARWSTDGTKVVSGGADNQVKIFDLATQQQQQIGQHDA
PVRSVRYVECGPTNTPVVASGSWDKTLRYWDMRSPTPVSTINLPERCYCMDSSQKLLVVG
CADRHITIIDLNNPQQIFKTTQSPLKWQTRTVACYPQANGFAIGSVEGRCAIQYITEAEQ
KKFGFSFKCHRKSGTGSVGGTLPRTTSSSSNESQAFPVNAISFHPVYGTFSTAGSDGTFC
FWDKDAKQRLKSFPELPGTVLSTAFNKTGSIFAYAVSYDWSLGFQGNRPDYPTFIKLHPT
KDVEIKQKNKR
NT seq 1116 nt   +upstreamnt  +downstreamnt
atgtcattcttgaatagttcgccatctacatctagcgcatcaagtacagccacgggtcaa
gagctagtcaacgatattctagtcaacaatccaccagaggactcaattgaagatatttcc
ttctcaccacaacaagatctacttgcggttgccagttgggataaaaaagtccgaatttat
gaaattgatcctaatacggggaacaaccaaggcaaagcactttatgagcacaatgcacct
gtgttttctgctcgatggtctactgatgggactaaagtagttagtggtggtgctgataat
caagtcaagatatttgaccttgcgacgcagcaacaacaacaaattggtcaacatgacgca
ccagtaaggtcagtcaggtatgttgaatgtgggcctactaatacacccgtagttgcaagt
ggatcttgggataaaacgttgagatattgggatatgagatctcctacaccagtcagtacc
atcaatcttcctgaaagatgttattgtatggattcatcacaaaagttgcttgttgttgga
tgtgccgatagacatataacaattattgatttaaacaatcctcaacaaattttcaaaact
acccaatctccattgaaatggcaaactagaacagttgcatgttacccacaagccaatgga
tttgctattggatcagttgaaggaagatgtgcaattcaatatataaccgaagctgaacaa
aagaaatttggcttttcatttaaatgtcataggaaatctggtacaggatccgtgggggga
acactaccacgtactacgtcaagtagctctaatgaatcacaagcgtttcctgtaaatgca
atttcattccatccagtatatggtactttcagtactgcaggatccgatggtacattttgt
ttttgggataaagatgcgaaacaaaggttgaaactgtttccagaattgccgggtactgta
ttatctactgcttttaacaagactgggtctatatttgcttatgctgtgagttatgattgg
tcattaggattccagggtaatagacctgattatcctacttttataaagctacacccaact
aaggatgttgaaattaagcaaaagaataagaggtag

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