Lodderomyces orthopsilosis: CORT_0C01450
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Entry
CORT_0C01450 CDS
T02488
Name
(RefSeq) Rna1 GTPase-activating protein
KO
K14319
Ran GTPase-activating protein 1
Organism
cot
Lodderomyces orthopsilosis
Pathway
cot03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
cot00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
CORT_0C01450
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cot03019
]
CORT_0C01450
Messenger RNA biogenesis [BR:
cot03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
CORT_0C01450
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_NLRC3
LRR_6
LRR_4
LRR_CARMIL
LRR_MHP1-HER1-GIP3
LRR_8
LRR_TMOD-LMOD
LRR_NXF1-5
LRR_NLRC4
ERM_C
Motif
Other DBs
NCBI-GeneID:
14539262
NCBI-ProteinID:
XP_003868426
UniProt:
H8X2H5
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All DBs
Position
3:295334..296572
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AA seq
412 aa
AA seq
DB search
MASIDVELGVTPETTYSIAGKQIKFNSEADIEPYIKELNEVKNVTKIDFSGNTIGIEASK
ALSEALLKHKDTVVEINFSDLYTGRLNTEIPQSLNYLLPALLKFPNLKLINLSDNAFGLQ
TIDPIEAYIAKAVSLEHLILSNNGMGPFAGSRIGGSLFKLAKAQIAAKKSSSLKTFICGR
NRLENGSVNYLAVGLRNHKDLEVVRLYQNGIRPAGISKLVEKGLSHNKKLKVLDLQDNTI
TTSGAIKLAESITNWPDLVELNLNDSLLKNKGSLEVVRAFGKNKKENLTVLKLQYNELET
DSLAVLADLIGEYLPNLKLLELNGNRFEEDSEHIESIKEVFEKRGFGEIDELDELEELDS
DEEEEEEEEEEDSLEVDLDLEELEKELAGVKLENKDSAVDDIADELSKAHIE
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atggcttcaatagatgttgagttaggagttactcctgaaactacttattccattgctgga
aaacaaatcaaattcaatagcgaagcggatattgaaccatacattaaggaactaaacgaa
gttaaaaatgtcaccaagattgatttctcgggaaacacaatcggaattgaagcatctaaa
gcattaagtgaagcacttttgaaacataaggatacagttgttgaaatcaacttttctgat
ttgtacactggacgtttaaacaccgagatcccacaatctttgaattatttattaccagca
ttattgaaatttccaaacttgaagttgatcaatttaagtgacaatgcgtttggtttgcaa
actatagaccctattgaggcatatattgcaaaagctgtatcattggagcatttgattttg
tcaaataatggtatgggtccatttgcaggttcaagaattggtggctcattgttcaagtta
gccaaagcccaaattgctgctaaaaagtcttcttcattaaagacatttatttgtggaaga
aacagattagaaaacggatccgtaaattacttggccgttgggttaagaaaccacaaagac
ttggaagtggtcagattataccaaaatggtatcagaccagcaggtatttccaaattagtg
gaaaagggattgagtcataacaagaaattaaaggtattggatttgcaagacaatacaatc
accacttctggtgccataaagttagctgaatcgattaccaactggccagacttggttgag
ttgaacttgaacgactctttgttgaaaaacaaaggttcattagaagttgttagagctttt
ggaaaaaacaagaaggaaaacttgactgtcctcaaattgcaatataatgaactagaaact
gatagtttggcagtgttggctgatttgattggagagtatttaccaaatttgaaacttttg
gaattgaacggtaatagatttgaggaggattcagaacatatagaaagtatcaaagaagta
tttgaaaagagaggttttggagaaattgatgagttggatgaattggaggaattagacagt
gatgaagaggaggaagaggaagaggaagaggaagattcattagaagttgatcttgatttg
gaggaattggagaaggaacttgctggtgttaaacttgaaaataaagattcagctgtagac
gatattgctgatgagttatcaaaagctcatattgaatag
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