KEGG   Lodderomyces orthopsilosis: CORT_0C02700
Entry
CORT_0C02700      CDS       T02488                                 
Name
(RefSeq) Vps28 protein
  KO
K12184  ESCRT-I complex subunit VPS28
Organism
cot  Lodderomyces orthopsilosis
Pathway
cot04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:cot00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    CORT_0C02700
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:cot04131]
    CORT_0C02700
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:cot04147]
    CORT_0C02700
Membrane trafficking [BR:cot04131]
 Endosome - Lysosome transport
  Endosomal sorting complexes required for transport (ESCRT)
   ESCRT-I complex
    CORT_0C02700
Exosome [BR:cot04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   CORT_0C02700
  Exosomal proteins of other body fluids (saliva and urine)
   CORT_0C02700
  Exosomal proteins of colorectal cancer cells
   CORT_0C02700
  Exosomal proteins of bladder cancer cells
   CORT_0C02700
SSDB
Motif
Pfam: VPS28
Other DBs
NCBI-GeneID: 14539862
NCBI-ProteinID: XP_003868549
UniProt: H8X2U8
LinkDB
Position
3:complement(590381..591142)
AA seq 253 aa
MSHPPEYAPTASTSFTISSKSSKFNQELTRSSLIKSPSNKSIYNSLAEISSILLSIEMLE
NSFIKDYITDKEKYTSTAYRLIYQYQIIIKGFDELKLPVLRELMPDLSSDLSNFLDLFTS
KFNLNCTQAVNRLLSGVPSTIDHVSGASDSGINTGNKANARLIAEITGNFITCMDAVKLN
YKTRDQLHPLLSDLVVNLNEFNESIEFNGKSKLINWLIKINNSEKELSQEDSDSFLNDLD
IAYKGFYTSLESH
NT seq 762 nt   +upstreamnt  +downstreamnt
atgtcacatccaccagaatatgcccccacggcatcaacatctttcactatctcctcaaag
tcgtctaagtttaaccaagaattaacccgatcgtcattaataaaatcaccatcaaataaa
tcaatttacaactcattggctgagataagttccattttactttcaatagaaatgttggaa
aactcattcattaaggattatatcacagataaggaaaaatatacatctacggcatataga
ctaatatatcaataccaaattataatcaaggggtttgatgaattgaaattaccagtgttg
cgagaacttatgccagacttatcgtcggatttatccaatttcttggacctattcacttcg
aaatttaacttgaattgtacacaagctgtaaatagactactaagcggtgtgccatcaaca
atagaccacgttagtggtgcatcagactcaggaataaacacaggtaataaggctaatgca
aggttaattgctgagatcacgggcaatttcatcacttgtatggatgcggttaaactaaat
tacaaaaccagagatcaattacatccattattaagtgatttagttgtcaatttgaatgaa
tttaatgaaagtatagagtttaatgggaaatcgaaattaattaattggcttataaagatt
aataattcagagaaggaactttcacaagaagattctgattcgtttctaaatgacttggat
attgcgtataaaggattctatacatctttggaaagccactaa

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