Candida orthopsilosis: CORT_0C02880
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Entry
CORT_0C02880 CDS
T02488
Name
(RefSeq) Pms1 DNA mismatch repair factor
KO
K10858
DNA mismatch repair protein PMS2
Organism
cot
Candida orthopsilosis
Pathway
cot03430
Mismatch repair
cot03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
cot00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
CORT_0C02880
03460 Fanconi anemia pathway
CORT_0C02880
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cot03400
]
CORT_0C02880
DNA repair and recombination proteins [BR:
cot03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
CORT_0C02880
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_mis_repair
MutL_C
HATPase_c_3
HATPase_c
Pox_RNA_Pol_19
Motif
Other DBs
NCBI-GeneID:
14539925
NCBI-ProteinID:
XP_003868568
UniProt:
H8X3M6
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Position
3:637038..639683
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AA seq
881 aa
AA seq
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MSSIQSINAVDISKITSGQVIIDLKSIIKELIENAIDAATSKIVVNFINYGIESITVQDN
GKGIQKEDFETVCLRSHTSKINDLDDLTKLGTLGFRGEALNSICALSTKVTITTSTLDTY
PRNYTLKYDQLGKLKEESSKLGGMSNKSGTTITIEHLFKNFTVRRKNFIKNSKREFHKAV
NFIINYLLIYPEIKFEVTNTNSSGKKQLVLSSKGGENNTTVENLITIYGNNGNTNLLNVD
IDIGFNAKLTGYISSYSFGLGRSTPDRQFLFVNKRPIVFRKLTKLINEVYKSFNHVQYPI
YVLNLDIDPELIDVNVLPDKTNVLIHNESRVLESIRESLIEFYTMQDKVIIPKSLWEHIP
FNKHGTATVEQTSTQEDTQARTIDIKKFIKKEEDSIDSLETQSSEARNEHINEANEAEKS
VGSKEFEIGQADKSTAKTDPLFCQEPENECPVKVEKPLLATAQAQRRICVEVLRSVDERN
MDKGSVGQFESQEIELDHSRNVPEETIVETENDYDQDDEVEEEKSESVYAISHNSVATSN
QSITSDVSPPEKNKELGAIKNQASDAIPTSQVLSNFSYNGPEIQTDISKLQDNHGVNFHP
KQSDACEGSLYIKIGNEEFEERPAKRFKSSSLYTKKKKLSSQELLSTISSPRNFDSEEVV
KRRQNIKVNQTLEDEGIYHISKSDFLKMKLVGQFNLGFILVHHRDNLFIIDQHASDEKYN
FEKLIENYSIQNQPLIRPQTLELNIIDEMLVIDHEAVFRHNGFKFTIDHEGKLGSRIVLI
SLPVYKNIMFDTNDFMELINLVNEQPSNKHIKCSKIRNILAMKACRSSIMIGSPLSRGKM
TQVVQNLSRLDKPWNCPHGRPTMRHLSELDNWNSKYFDYSL
NT seq
2646 nt
NT seq
+upstream
nt +downstream
nt
atgtcactgattcaaagtatcaatgcggtggacatctccaaaatcacttccggacaggtc
attatcgatcttaaatcaatcattaaggaactaattgaaaacgcgattgatgccgcaacg
tcgaagattgtagtcaactttatcaactacggtattgaatcgataactgttcaagataat
ggaaagggaatacaaaaggaagattttgaaacagtgtgcttacgaagtcatacttcaaaa
attaatgatcttgatgatttgaccaagttgggaacattggggtttcgaggtgaagcattg
aattcaatttgcgccttatctaccaaagtgacaataactaccctgactttggatacttat
cccaggaactacactttgaaatatgatcagcttggcaaactaaaagaagagtcatcgaaa
ttaggtggaatgagtaacaaatcaggcacgactatcacaattgagcatttattcaagaat
tttacagttcgacggaagaactttatcaaaaactcgaaaagggagtttcataaagcagtc
aactttatcatcaattatttgctaatataccctgaaatcaaatttgaagtgaccaatacc
aattctagtggtaagaaacaattagtgttgtcatcaaagggaggagaaaataatacaaca
gtggagaatttgataacgatatatggaaataacggtaataccaacttactcaatgtcgat
atcgatattggttttaatgcaaaattaactggttacatctcatcatattcttttggattg
ggtcgatcgacgccagatagacaattcttgtttgttaataagagacctattgtgtttaga
aaacttaccaagttgattaacgaagtttacaagtctttcaatcatgtgcaatatccgatt
tatgtattgaatcttgacattgatcccgagctcattgatgttaacgtcttaccagacaag
actaatgtattgatccataatgagtcacgagttttggaatctatacgtgaaagtcttatt
gagttttataccatgcaagataaagtgattattccaaaaagtttgtgggagcatatacca
ttcaataaacatggcacggccactgtggagcagacttcgactcaagaggatacccaagct
cgtacaattgatatcaaaaagtttataaagaaagaagaagatagcattgacagtttagaa
acccaaagttcagaagcgaggaatgaacatataaatgaagctaatgaggcagaaaagtct
gtagggagcaaggaatttgaaattggtcaagcagataaatcaacagcaaaaacagaccca
ttgttttgtcaggaaccagagaatgaatgtccagttaaagtggagaaaccgcttttggca
accgcacaagcccaaagacggatctgcgttgaggttttgcgttcagttgatgagcgtaat
atggacaaaggatctgtgggccagtttgaactgcaagaaattgaacttgatcattcaaga
aatgtacctgaagagaccattgttgagaccgagaatgattatgatcaagatgatgaggtg
gaggaggagaagtctgaactggtatatgccatctcccataatagtgttgcaaccctgaat
caactgattacaagcgatgtatctccaccagaaaagaacaaggaacttggtgcgattaaa
aatcaagctagtgatgcaattcccacgtcacaggtgttgtcaaacttctcctacaatgga
cctgaaattcaaacagacattagtaaattgcaagataatcatggtgtaaactttcacccc
aagcaatcagatgcctgtgaaggaagcttgtacattaagataggcaatgaagagtttgaa
gaaagaccagcaaagaggttcaagtcgtcaagtttgtacaccaaaaagaagaaactttca
tcacaagaattgctatctacgatatcctcgccacgcaattttgatagtgaagaagtagtc
aagagaagacaaaatattaaggttaaccaaactttagaggatgaaggtatttatcacatt
tctaaatccgatttccttaaaatgaaattggtgggacaattcaacttggggtttatccta
gttcatcatcgtgacaatttattcattatagatcaacacgcatctgatgaaaaatacaat
tttgaaaaattgattgaaaattacagtattcaaaatcaaccattgattagaccccaaaca
cttgaattgaatattattgacgaaatgttagtaattgatcacgaagcagtttttagacac
aatgggttcaaattcaccattgatcatgaaggtaaacttggatcaagaattgtcctcatt
tcattaccagtatacaagaatataatgtttgacactaatgatttcatggaactcatcaat
ttggtgaatgaacaaccaagtaataagcatattaaatgttccaagattaggaatatttta
gccatgaaggcatgtcgaagtagtataatgattggatcgccgttatcaaggggtaaaatg
acgcaagttgtgcagaatttaagtcggcttgataagccttggaactgcccacacgggaga
cctactatgagacacttgagcgagttagataattggaatagcaagtacttcgactatagc
ttatga
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