Candida orthopsilosis: CORT_0C04060
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Entry
CORT_0C04060 CDS
T02488
Name
(RefSeq) Apn1 protein
KO
K10771
AP endonuclease 1 [EC:
3.1.11.2
]
Organism
cot
Candida orthopsilosis
Pathway
cot03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cot00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CORT_0C04060
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cot03400
]
CORT_0C04060
Enzymes [BR:
cot01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
CORT_0C04060
DNA repair and recombination proteins [BR:
cot03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
CORT_0C04060
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
Motif
Other DBs
NCBI-GeneID:
14539323
NCBI-ProteinID:
XP_003868684
UniProt:
H8X3Z2
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All DBs
Position
3:join(921129..921142,921202..922288)
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AA seq
366 aa
AA seq
DB search
MPPKVKAPKVKVEKPFAYERNLNSRFKFGAHVGMSGGIYKAVTNSMNIGGNSFALFLKSP
RKWVSPALKPDDIAKFAELCKQHNYNPRTDILPHGSYFINLANPDPEKEAKAYDSFLDDL
KRCEQLNIGLYNFHPGSSLDGDRKQALKQLANNINKAIKDTAFVKIVIENMAGHGNLIGS
DLKDIREVIDMVDDKSRVGVCLDTCHSFAAGYDITDEDKWNAFLKQFDEIVGAEYLSAIH
LNDSKAPLGANRDLHQKLGQGFLGLEVFRAIANCDRLQGIPIVLETPVGDDDEIYGEEIK
LLEWLEGRPKDDADFIAKKDELWALGKKERDEQLKKFEVKTKKRAKDEEKNGDITKMVKK
KKVGAK
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atgccgccaaaagttaaagcacctaaagtcaaagtggaaaaaccatttgcatatgaacga
aatcttaatagtagattcaaatttggagctcacgtgggtatgtcaggtggaatatataaa
gcagtcactaattctatgaatattggtggtaatagctttgcattgtttttgaaatcgcct
cgtaaatgggtatcgccagctttaaaacctgatgatattgctaaatttgctgaattatgc
aaacaacacaattataacccaagaactgatattttacctcatggttcatattttattaac
ttagccaacccggatcctgaaaaggaagctaaagcatatgattcatttcttgatgatttg
aaacgatgtgaacagttgaatattggactatataatttccatcctggatcaagtttagat
ggtgatcgaaaacaagcattgaaacaactagctaataatatcaataaagcaatcaaggac
actgcatttgttaaaattgtaattgagaatatggctggtcatgggaacctcattggatct
gatttgaaagatatacgtgaagtgattgatatggttgacgataaatcacgagtaggtgtt
tgtttagacacctgtcattcatttgctgctgggtatgacattacagacgaggataaatgg
aatgcatttcttaaacaatttgatgagattgttggagctgagtaccttagtgctatacat
ttaaatgattcaaaagctccattaggagccaatcgtgatttacatcagaaattgggtcaa
ggtttcctcggactagaggtgtttagagctatcgccaactgtgatagattacaaggtata
cctattgtattggaaacccctgtaggagacgatgatgaaatatatggagaagaaattaaa
cttcttgaatggcttgaaggtagaccaaaagatgatgctgattttattgccaagaaggat
gagttatgggcattaggtaaaaaggaaagagatgaacaattgaaaaagtttgaagtaaag
acgaaaaaaagggctaaagatgaggaaaaaaatggtgatattacaaagatggtgaagaag
aagaaggtgggtgcaaaatag
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