Candida orthopsilosis: CORT_0C04070
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Entry
CORT_0C04070 CDS
T02488
Name
(RefSeq) Nup116 protein
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
cot
Candida orthopsilosis
Pathway
cot03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
cot00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
CORT_0C04070
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cot03019
]
CORT_0C04070
03036 Chromosome and associated proteins [BR:
cot03036
]
CORT_0C04070
Messenger RNA biogenesis [BR:
cot03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
CORT_0C04070
Chromosome and associated proteins [BR:
cot03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
CORT_0C04070
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin2
Nucleoporin_FG
Nup98_GLEBS
Motif
Other DBs
NCBI-GeneID:
14539324
NCBI-ProteinID:
XP_003868685
UniProt:
H8X3Z3
LinkDB
All DBs
Position
3:922429..925746
Genome browser
AA seq
1105 aa
AA seq
DB search
MFGGGTSSGFGGFGTNTANTNSPFGGGANTTTNTNTNTNASPFGTSTTNTGGGLFGNASS
NPTSSFGSSNVFGSGNTGTTGTSAFGSNTAGASGGGLFGSNQASNTTASASPFGQPQQSA
PSVFGSGTQGSSAFGSSNAGTGGGLFGSKPATTSTFGFGSPAANNTTTSPFGASTATTNA
FGATSGDPNANNGTAVKPFSPHSEKDSANINNVFQNICCMPEYKNYSFEELRLKDYEQGR
RFPPNQGAAGGAFGSTANTGTGFGFSGTAQQQPSTGGGLFGGQASSSPFGNTGNTTSGFG
SSFNKPAASPFGSSGAFGSTQQQASPFGASNTGNAFGANKPGTGFGSTNTNTGGGLFGGA
SGSNNAFGQKPATGFGSGNTSTFGSSGGAFGNTGASPFGQANNTQQQQQQGGGLFGGSNT
GGAFGNTSGGFGQSNTGNAFGSNTGASGGGLFGGQQSSGFGAKPSTGFGSTGGGLFGQQG
NQQQGGGLFGGGAQQNQQQQQGGGLFGAKPAGSTSMFGQSGNAGTNTGGGLFGGQTNNNA
GATSGGLFGAKPATSGGLFGSNTGTTGTTGGGLFGQQNNQQQSGGLFGAKPAGTTGGGLF
GSTQQSGATGGGLFGGGAQQNQQQQPQQQGGGLFGGSNTGGGLFGSKPAGTAPSGGGLFG
SAQQGGNTSGGLFGGGANNAGGATGGGLFGSTQGATGGTGGLGGGAGGFGSGGGLFGNAN
SQQQQQQQQQPGQPSFLQKTQQQQTQPLANINSQDPYGQNPLFQSISGTTPQQQQSQGYG
ADQKPRATVIRRSFAVPQQNKKVVTLGNTAQRITPLFKVSVLPSANKPVEKAQDELFKQK
SDSIFTPITDSAIITSDIFRPNNNFKKLVVEKSSKGKYNLAINDGNDETNSPAKQVSFVL
DSDKKKNGDGIKEINATQAAKKNGEAKVDFKSNEVVINGDNKKEESTKTNEKTKETDEDE
VNEEGYWTSPSISQLKTKSLSELKSIANFKIGRKGYGYLQYLEPIDLSTMLNLDDLFSLV
EFDNKSCIVYPDDNLKPRKGEGLNLPAQITLHNCWPLNKQDRLPILDPHSDIVKLHIENL
QKLPGMKYVKYDPVSGDWTFTVDEM
NT seq
3318 nt
NT seq
+upstream
nt +downstream
nt
atgtttggaggaggtacatcttcaggatttggaggatttggtacaaatactgccaatact
aactccccgtttggcggtggcgccaacacaactacaaacacaaacacaaacacaaacgca
tcaccatttgggacaagcaccaccaacacaggagggggattatttggcaatgcatcatcc
aatccaacatcatcttttggatctagtaatgtctttggatctggtaacactggtactaca
ggaacactggcatttggaagtaatactgctggagcaagtggtggaggattatttggatca
aatcaagctagtaatacaactgcatctgcatcgccttttggacaaccacaacaatcagca
ccatcagtttttggaagtggtactcagggctcttctgcatttggatcttcaaacgcagga
actggcggtggactctttggtagcaagccagcaactacatcaactttcgggtttggttca
ccagcagcaaacaataccacaacatcaccatttggggcgtcaactgcaactactaacgct
ttcggagctactctgggtgatcccaatgccaataacggtaccgctgtgaaaccattttca
ccacacagtgaaaaagattcagcaaatataaataatgtgtttcaaaatatatgttgtatg
ccagaatataagaattattcatttgaagagttacgattgaaagattatgaacaaggaaga
aggttcccaccgaatcaaggtgcagcaggaggggcatttggaagtactgcaaacacaggc
actggatttggatttagtggtactgcccaacaacaaccatctactggaggaggacttttt
ggtggacaagctagttcatcaccatttggaaatactggtaacactacatctgggtttggt
tcaagttttaacaagccggcagcatccccatttgggtcatcgggagcgtttggatcaacg
caacaacaagcatctcctttcggggcaagtaacaccggtaatgcatttggagctaataaa
ccaggaactggatttggatcaaccaataccaacacaggtggtggattatttggtggtgct
agtggatcgaataatgcatttggacaaaaaccagcgactgggtttggaagtggtaacact
tcgacatttggatcatctggtggcgcgtttggaaatactggcgcttcaccatttggacaa
gctaacaatacccagcaacaacaacaacaaggtggtggattatttggtggatccaatact
ggaggcgcatttggtaatacatcaggtggatttggacaatcaaacacaggtaatgcattt
ggatccaatactggcgcttcaggtggtggattatttggtggccagcaatcgctgggtttt
ggtgctaagccaagtacaggatttggttccactggtggaggactttttggccaacaaggt
aatcaacagcaaggaggtgggttgtttggtggcggtgcacaacaaaatcaacaacagcaa
caaggtggtggattatttggtgctaagccagcaggatctacatcaatgtttggccaaagt
ggtaatgccggaaccaatacaggtggtggattatttggaggtcaaaccaacaataatgcc
ggtgcaactagtggtggtctttttggagctaagcctgcgacaagtggtggattatttgga
agtaacactgggactacaggcactacaggaggtggattatttggtcagcagaataatcaa
caacaaagtggtggactatttggagccaaacctgctggtacaactggtggtgggctattt
ggaagtacgcaacagagtggagctacaggaggtggtttatttggtggaggtgcgcaacaa
aatcaacaacagcaaccacagcaacaaggtggtggattgtttggaggatcgaatactgga
ggtggattatttggttctaaacctgctggaactgcaccttctggaggggggctttttgga
agtgctcagcaaggtggtaacacatcaggtggattatttggaggaggagccaataacgct
ggtggagcaactggcggtggcttatttggatcaactcaaggtgctacaggtggtactggt
ggtttaggaggaggagcgggagggtttggttctggcggtgggttatttggtaatgccaat
tcacaacagcagcaacagcagcaacaacaacccggacaaccactgtttttacaaaagacc
cagcaacaacaaacgcaaccattggccaacatcaactctcaagacccatatggacaaaat
cccttattccaatcgatttcaggaactacccctcaacaacaacagtcacaaggctatggt
gctgatcaaaagccaagagccactgtaattagacgatcatttgcagttccacaacaaaat
aaaaaagtggtgacattgggcaatacagcacaaagaattacaccgttatttaaagttagt
gtattaccatcagctaataaaccagttgaaaaagcccaagatgaacttttcaaacaaaag
agtgacctgatattcactccaattactgatctggctatcataacgtcagatatatttcgt
ccaaataataatttcaagaaattagttgttgaaaagagtagtaaagggaagtataatttg
gcaattaatgatggaaatgatgaaaccaatagccctgctaaacaagtttcgtttgtgttg
gatagtgacaagaagaagaatggggatggaattaaggaaattaatgctactcaagctgct
aaaaagaatggtgaggccaaagttgatttcaagagtaatgaagttgtcattaatggtgac
aacaagaaagaagaatctaccaagacaaatgaaaagacaaaagagaccgatgaagatgaa
gttaatgaggaagggtattggacatcaccatctatttcccaattaaaaactaaatcatta
tctgaactcaaatcaattgccaatttcaaaattggtcgcaaaggatatggatacttgcaa
taccttgaaccaattgatttatcaacaatgttaaacctagatgacctattctctcttgtt
gaatttgataataaatcatgtatcgtttaccctgacgacaacttgaaacctcgcaaggga
gaaggattaaatttacctgctcaaattacattacataattgttggccattgaataagcag
gatagattacctatattagatcctcattctgatattgttaaattacatattgaaaattta
cagaaattgccaggaatgaagtatgtcaagtatgatcctgttagtggcgattggacattt
acagttgatgaaatgtaa
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