Candida orthopsilosis: CORT_0C04360
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Entry
CORT_0C04360 CDS
T02488
Name
(RefSeq) Ded1 protein
KO
K11594
ATP-dependent RNA helicase DDX3X [EC:
5.6.2.7
]
Organism
cot
Candida orthopsilosis
Brite
KEGG Orthology (KO) [BR:
cot00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cot03019
]
CORT_0C04360
03041 Spliceosome [BR:
cot03041
]
CORT_0C04360
03036 Chromosome and associated proteins [BR:
cot03036
]
CORT_0C04360
Enzymes [BR:
cot01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
CORT_0C04360
Messenger RNA biogenesis [BR:
cot03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
CORT_0C04360
mRNA cycle factors
Common to processing body (P body) and stress granule
CORT_0C04360
Spliceosome [BR:
cot03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
CORT_0C04360
Chromosome and associated proteins [BR:
cot03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
CORT_0C04360
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Helicase_C_2
Motif
Other DBs
NCBI-GeneID:
14539407
NCBI-ProteinID:
XP_003868713
UniProt:
H8X421
LinkDB
All DBs
Position
3:complement(986461..988371)
Genome browser
AA seq
636 aa
AA seq
DB search
MSDISQQMNNLSVQENGSDGQYQPKQNGRRQYVPPHLRNRSGQQSNSSDEVPFGGSRRNG
YDNRGGFSSRGNGFGFNGSRGGARGGSGFGGGRYQRQVPGVGKWVDGKHVPAPRNERLEV
ELFGVPEEEGTQSSGINFDNYDDIPVEASGDDVPEPITAFTAPPLDELLVENIKFSKFTK
PTPVQKYSVPIVAGGRDLMACAQTGSGKTGGFLFPVLSESYANGPAPVPESTGTFSSHKA
YPTVLVMAPTRELVSQIYDESKKFAYRSWVRPCVVYGGADIGNQIRQLDRGCDLLVATPG
RLKDLLERGRVSLANIKYLVLDEADRMLDMGFEPQIRQIVQECDMPSVENRQTLMFSATF
PRDIQMLARDFLKNYIFLSVGRVGSTSENITQKVLYVEDDEKKSVILDMLNANSAGLTIV
FTETKRMADNLADFLYDQGFPATAIHGDRSQYEREKALAAFKNGKAPILVATAVAARGLD
IPNVSHVINYDLPGDIDDYVHRIGRTGRAGNVGIATAFFNRNNKNIAKDMIELLSEANQE
VPDFLTKISRESAFGRGGRGSSRGGGYGGRGGATRDFRRSGGGGHSNSGWGSSAGSGWGS
SGNSGWGNSNGSSGGYGSRSNFNSSYGNPSASTSWW
NT seq
1911 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacattagtcaacaaatgaacaacttgagtgttcaagaaaacggaagcgacggt
caatatcaaccaaaacaaaatggtcgcagacaatacgtgccaccacatttgagaaacaga
tctggccaacaatcaaacagttctgatgaggttccatttggaggatctcgccgtaacggg
tatgataacagaggaggattttcttccagaggcaatggttttggatttaatggctccaga
ggtggagctagaggaggatctggatttggaggtggtagataccaaagacaagtcccaggt
gtaggtaaatgggttgatggaaaacacgttcctgcaccacgtaacgaaagattggaagtt
gaattgttcggtgttccagaagaagaaggtactcaatcttcaggtatcaactttgacaac
tatgacgacattccagttgaagccagtggtgacgatgtaccagagccaattaccgctttc
accgcgccaccattggatgaattattggttgaaaatattaaattctcaaagtttaccaag
ccaactccagttcaaaagtattccgttccaattgtcgctggtggtagagatttgatggct
tgtgctcaaactggttcaggtaaaactggtggtttccttttccctgttttatctgaatct
tatgccaacggtccagctccagttcctgaatctaccggaactttttcatcacacaaagct
tatccaacagttcttgttatggccccaaccagagaattggtttcccaaatctacgatgaa
agtaaaaagtttgcttacagatcatgggttcgtccttgtgtcgtttacggtggtgctgat
attggaaatcaaatcagacaattagacagaggttgtgacttgttagtcgctactccaggt
cgtcttaaggatttacttgaaagaggaagagtctcattggccaacatcaagtatttggtt
ttggatgaagctgatagaatgttggatatgggttttgaacctcaaattagacaaattgta
caagaatgtgatatgccaagtgttgaaaacagacaaactttgatgttttctgctacattt
ccaagagatattcaaatgttggctcgtgatttcttaaaaaactatattttcctttcagtt
ggtagagttggttccacttcagaaaacattactcaaaaggttttgtatgttgaggatgat
gaaaagaagtcagttatcttggatatgttgaatgccaacagtgcaggtttgacaattgtc
tttactgagaccaagagaatggcagacaacttggctgatttcttgtatgaccaagggttc
cctgctactgccatccatggtgacagatcccaatatgaaagagaaaaggctcttgctgct
ttcaagaacggtaaagcgccaattttggtagccactgctgttgccgctagaggtttggat
attccaaatgtttctcacgttattaactatgacttgccaggtgacattgatgattacgtt
catagaattggtcgtactggtcgtgcaggtaacgttggtattgctactgctttttttaac
agaaataacaagaacattgccaaggatatgattgagttattatctgaggctaatcaagaa
gttcctgatttcttaaccaagatttcaagagaatcagcctttggtagaggtggtcgtgga
tcttcccgtggtggaggatacggtggtcgtggaggtgccaccagagattttagaagatct
ggcggcggtggacactccaattcaggatggggtagtagtgctggtagcggatggggaagt
tcaggaaacagtggatggggaaactccaatggttcaagtggtggctacggttctcgctca
aacttcaactcaagctatggtaacccatctgcttcaacttcgtggtggtaa
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