KEGG   Lodderomyces orthopsilosis: CORT_0C04660
Entry
CORT_0C04660      CDS       T02488                                 
Name
(RefSeq) U1A component of the U1 snRNP
  KO
K11094  U2 small nuclear ribonucleoprotein B''
Organism
cot  Lodderomyces orthopsilosis
Pathway
cot03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cot00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    CORT_0C04660
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cot03041]
    CORT_0C04660
Spliceosome [BR:cot03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    CORT_0C04660
 Complex B
    CORT_0C04660
 Complex C
   U2 SnRNP specific factors
    CORT_0C04660
SSDB
Motif
Pfam: RRM_1 RRM_occluded RRM_5 RRM_MUD2_C RRM_10 RRM_ACIN1 NAD_binding_1 Ntox33
Other DBs
NCBI-GeneID: 14539725
NCBI-ProteinID: XP_003868744
UniProt: H8X2Y0
LinkDB
Position
3:1047735..1048424
AA seq 229 aa
MSVEPKQTVYINNINDKVSINKVKSVLTILLQQFRPTNISLAKTLRLKGQAFVTFETIDD
ASKAIQSLNNQELFSKCINVTFAKSNSDTLLDKKELKRIRKVRHDEHKIKKQPQTNSKSK
TKITKSTAAGKNKTKKQSQVDVQSWKTLPPNRILLLQNISSSSLITKEAIDEYFRSYAGF
EMARFVATRHLSFIEFENEDIAMECLQSVDEDDMRGKFGDDIVFSYAKK
NT seq 690 nt   +upstreamnt  +downstreamnt
atgtcggtcgaacccaaacaaacggtatacattaataacataaatgataaggtgtcaatc
aataaagtgaaatctgtgctaactatcctcctccagcaattcagaccaacaaatatttcc
cttgctaaaaccctcagactcaaaggacaagcatttgttacatttgagaccatcgatgat
gcatccaaagcgattcaaagcttgaataatcaagagttatttagtaaatgcataaatgtc
actttcgccaaactgaatagcgatacactactagacaagaaagaattaaaacgtatcaga
aaagtacgacatgatgaacacaagattaaaaaacaaccacagaccaattccaaatccaaa
actaagatcaccaaatcgactgctgctggtaagaataagacaaagaagcaaagtcaagtt
gatgttcaaagctggaagaccttgccaccaaatcgtatacttctattgcaaaatatcagt
tcatcctcacttatcaccaaggaagcaatcgatgagtactttcgaagttatgcagggttt
gaaatggctagatttgttgccacgagacacttgtcgtttattgagtttgagaacgaggat
attgcaatggaatgtttacaatcagttgatgaagacgacatgaggggaaaatttggtgat
gatattgtgttttcgtatgcgaaaaaatag

DBGET integrated database retrieval system