Lodderomyces orthopsilosis: CORT_0C04790
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Entry
CORT_0C04790 CDS
T02488
Name
(RefSeq) hypothetical protein
KO
K14411
RNA-binding protein Musashi
Organism
cot
Lodderomyces orthopsilosis
Pathway
cot03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cot00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
CORT_0C04790
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cot03019
]
CORT_0C04790
Messenger RNA biogenesis [BR:
cot03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
CORT_0C04790
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
Motif
Other DBs
NCBI-GeneID:
14539815
NCBI-ProteinID:
XP_003868757
UniProt:
H8X2Z3
LinkDB
All DBs
Position
3:1088404..1089870
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AA seq
488 aa
AA seq
DB search
MSNLDDDEALFEDLYDDDNTSPKKDTQEETTSKENAVEKSAAETGSDAAVVDVKSSEAPT
TSTTEQTDAQSNLAPPPPPPSVSGDATQVSADIQSGEQNQQANSDAATNPGQPTMPAFPF
DPTQFAQFASMAQMQGQMPGQVPGQLPSGIPPPPISVPPKQAVSEIGKDSGKMFIGGLNW
DTTEEGLVNYFSKFGEITDYTIMKDNATGRSRGFGFLTFKDPSAVDVVIKQDHILDGKLI
DPKRAISREDQDRVGKIFIGGIDPMVSENEFNDFFSKFGTIIDCQLMIDKDTGRSRGFGF
ITFDSPDAVDRVCVNKFLTLKGKAMEVKRAAPRGQHNQQVMLQQQQAQQQAQQQGQFYNP
YGAGQYGQMYPQMNPAMNPAMNQWYQWYMFQQAQAQQQQQDGSSDSQPAQPLNPQQQADD
PDLEESGVGTSRNSASGSPPAGDEGANTRPNIPRGPKRPNGPSNFRGRGGYRRGRGGFHP
YQRGGRRY
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atgtctaatttagatgatgatgaagccctctttgaggatttgtacgatgacgataacaca
agtcccaaaaaggacacccaagaggaaaccacgtcgaaggagaatgctgttgagaagctg
gctgccgagacaggactggatgctgcggtagtagatgtgaaatcttctgaagccccgaca
acttcaacaacggagcagactgatgctcaatcaaacttggctccaccacccccaccacca
tctgtaagtggtgacgcaactcaggtgtcagcggatattcagtctggtgagcagaatcag
caagctaactcagacgctgccacaaatccaggacaaccgaccatgccagcattcccattt
gaccccacacaatttgctcaattcgccagtatggcgcaaatgcagggccaaatgcccggt
caggttccgggacaattgccgtcgggtattcctccaccaccaattagtgtgccacctaaa
caagcggtttctgaaattggaaaggatagtggtaaaatgttcattggtgggctaaactgg
gataccaccgaggaaggcttggtgaactacttttccaagtttggagaaatcactgactac
acaattatgaaggataacgctacaggaagatcaagagggtttggctttttaacattcaaa
gacccaagtgctgtagatgtagttatcaaacaagaccacatacttgatggtaaactaatt
gaccccaaacgtgctatttcgagagaagatcaagatagggtaggtaagatctttattggt
ggtattgacccaatggtgtcggaaaatgaattcaatgatttcttctccaagtttggtact
attattgattgtcaattgatgattgataaagacacgggacggtcgagaggttttgggttt
attacgttcgattcaccagacgcagtggatagagtatgtgttaataaatttttgacttta
aaaggcaaagcaatggaggtaaaacgtgctgctccgagaggtcaacacaatcaacaagtg
atgttacagcaacaacaagctcaacagcaggcccagcagcaaggccaattctacaacccg
tatggagccggtcaatatgggcaaatgtatcctcaaatgaaccccgccatgaatccagcc
atgaaccaatggtatcaatggtacatgtttcaacaagcccaggcacaacaacagcaacaa
gatggctcgtcagactcccaacctgctcagcctcttaatccacaacaacaagctgatgat
ccagatttggaagagtcaggcgttggtacttctagaaattccgcctcaggctctcctcca
gctggagatgaaggtgccaataccagaccaaatattccacgcggtccaaaaagaccaaac
ggtccttccaactttagaggaagaggtggttacagaagaggtagaggtgggttccatcct
tatcaaagaggaggaaggagatattaa
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