Candida orthopsilosis: CORT_0C07040
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Entry
CORT_0C07040 CDS
T02488
Name
(RefSeq) Rdh54 DNA-dependent ATPase
KO
K10877
DNA repair and recombination protein RAD54B [EC:5.6.2.-]
Organism
cot
Candida orthopsilosis
Pathway
cot03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cot00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
CORT_0C07040
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cot03400
]
CORT_0C07040
DNA repair and recombination proteins [BR:
cot03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
CORT_0C07040
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
HDA2-3
Peroxin-22
ZGRF1-like_N
Motif
Other DBs
NCBI-GeneID:
14539595
NCBI-ProteinID:
XP_003868979
UniProt:
H8X4C3
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Position
3:complement(1587183..1589660)
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AA seq
825 aa
AA seq
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MGNIKPNAPFKPPRPFKEGDIQSLPPKDFPKRNGLLAKRPSPPINTAPVTAKRAKSESIP
DSSGMKWTIQWRKKTNKKNKNWDGDGFATIRSTTFGCEITIKNSDGKVLSKKTFNSDPDL
DDVVPIGMYEIILDEKLSQEEPNTSNVIDQVDKAEEVVVAPKIIQTQFKKVVQDEVFETR
KPLYDQNQDECTLTPPPNVASHVPVRIDPILASKLRPHQLEGVSFLYECLMGFRNFKGNG
CLLADEMGLGKTLMTITTIWTLLKQNPYPDQKKPVVNKVLVVCPVTLINNWREEFKKWLG
LNKVNVLTLNNSMSDDKRDIINFGKLNVYQVLIINYEKVLAHYEELSTIPFDLLVCDEGH
RLKNSANKVMINLTKLNISKKIVLTGTPIQNYLVEFYTLVSFLNPRVLPDAKTFQKEFIN
PITRARDVNCFNQEIKKQGEEVSQRLISLTHKFILRRTQAILENYLTNKTDILLFVPPTQ
LQLDLFDLIKKSEKFQQLDSGTISLSLINLFRKICNSPSLLASDDFYKSITDGSLKLSTS
SGKLNALIPLVLEITAQKEKLVLISNYTTTLDLLEKVIKKLNLQYLRLDGTTPNNIRGKL
VNRFNRDESISVFLLSSKSGGTGINLVGASRLILYDNDWNPSTDLQSMSRIHRDGQRKPC
YIYRIFTTGCIDEKIFQRQLMKNKLSSKFLDNDASSKSDIFDYNDLKNLFEIDVGTKSNT
HDLLGCSCAGDGFMLSHEIESDEDEDKTAIAKEWMSAAELQENIDKNGYSTTTKAVKKAL
NDYHHYTPELNQNLEFDSVLSRILSNKLFKNRSPFTYIMQKSNTQ
NT seq
2478 nt
NT seq
+upstream
nt +downstream
nt
atgggcaatattaaaccaaatgccccattcaaacctcctagaccattcaaagagggtgac
atacagagcttgccaccaaaagatttccccaaaagaaatggtttacttgcaaaacgtccc
agcccgccaatcaatactgcacctgttactgcaaagagagctaaatccgaatctatccca
gactcatcgggtatgaaatggacaatacagtggaggaagaaaacaaacaagaaaaacaag
aactgggatggggatgggtttgccacgattagatcaactacatttggttgcgaaatcaca
attaaaaattcagatggaaaagtcttgagtaaaaagacgtttaacctggacccagacttg
gatgatgtggtacctattggaatgtacgagattatattggatgagaaattgagtcaagaa
gaaccaaatacctcaaatgttatcgaccaggttgacaaagcagaggaagtggtggttgct
cccaaaattatacagacacagtttaagaaagtggtacaggatgaagtttttgaaaccagg
aagccattgtatgatcagaatcaggatgaatgtaccctaacccctcctccaaatgttgca
tcacatgttccggtgagaatcgatcctatcctcgcatccaaattgagaccgcatcaattg
gaaggtgttagctttttgtatgaatgtttgatgggattccgtaatttcaaaggaaatggt
tgtcttttggcagatgaaatgggattgggtaagacgttgatgacgataaccactatttgg
acgttattgaaacaaaacccctatcctgaccaaaagaagccagttgtcaacaaggtgttg
gtcgtttgtccagttactttgatcaacaattggagagaagaattcaaaaagtggctaggc
ttgaacaaggtgaatgttttgactctaaacaattcaatgtctgacgacaagcgtgatatt
atcaattttggaaagttgaatgtctatcaagttctcattatcaattacgaaaaagtactt
gctcactacgaagagttgtccacaattccattcgacttattggtttgtgacgaagggcat
agactaaaaaatagtgccaataaagtgatgattaatttaacaaagttgaatatctcgaaa
aagattgtgttgacagggacgccaatacagaactacttggttgaattttacacacttgtg
tcctttttgaatccacgcgtcttgccagatgcaaaaacgtttcaaaaagagtttatcaat
ccaattacgagggcaagagatgtcaattgtttcaatcaagagatcaaaaaacaaggtgaa
gaagtgtcacagcggttgattctgttgacacacaagtttatccttcgacgtacacaggca
atacttgaaaactacttgacaaataaaactgatatattactatttgtcccaccaacacaa
ttacagctagacttgtttgatctcataaagaagtcagaaaagtttcagcaattggactct
gggacaatctcattgtcacttatcaacttgtttcgcaagatttgcaactctccatcatta
ttggcatcagatgacttttataaaagtataaccgatggaagtttgaaattgtctaccagt
tctggtaaactaaatgcactcataccgttggtgttggagatcactgctcaaaaagagaaa
ttagtgctcatttcaaactacaccaccactttggatttgttggagaaagtgatcaaaaag
ctcaatttacaatatttacgtttagacggcacaactccaaacaacataagaggcaagctt
gtcaacagattcaacagggacgaactgattctggtgttcctactatcgtccaagtctggt
gggactggcatcaacttggttggtgcatcaaggttaatcctatacgataatgattggaac
ccctcgacagatttgcaatccatgtcaagaatacatcgtgatggacaaagaaagccatgt
tatatttacaggatcttcactacaggttgtattgatgaaaagatcttccagcggcaattg
atgaagaacaaattgagttcaaaatttcttgacaacgatgcctcatcgaaatcggatatt
tttgattataatgacttgaagaatttgtttgaaattgacgtggggaccaagtcaaacacc
catgatttattaggttgttcatgtgccggtgatggtttcatgttgtcgcatgaaattgaa
tcagatgaagatgaagataaaactgcaatagcaaaagaatggatgtccgctgccgagctt
caagaaaatattgacaaaaatgggtatctgaccacgacaaaagcggtgaaaaaagcgtta
aacgattaccatcattatactcctgagctaaaccaaaacttggagttcgattcagtattg
agtagaattctcagcaataagttattcaaaaacagatcaccattcacatatataatgcaa
aagagcaacactcagtaa
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