Candida orthopsilosis: CORT_0D00170
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Entry
CORT_0D00170 CDS
T02488
Name
(RefSeq) Rfc4 heteropentameric replication factor C subunit
KO
K10755
replication factor C subunit 2/4
Organism
cot
Candida orthopsilosis
Pathway
cot03030
DNA replication
cot03410
Base excision repair
cot03420
Nucleotide excision repair
cot03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cot00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CORT_0D00170
03410 Base excision repair
CORT_0D00170
03420 Nucleotide excision repair
CORT_0D00170
03430 Mismatch repair
CORT_0D00170
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cot03032
]
CORT_0D00170
03036 Chromosome and associated proteins [BR:
cot03036
]
CORT_0D00170
03400 DNA repair and recombination proteins [BR:
cot03400
]
CORT_0D00170
DNA replication proteins [BR:
cot03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
CORT_0D00170
DNA Replication Termination Factors
ELG1-RFC complex
CORT_0D00170
Chromosome and associated proteins [BR:
cot03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
CORT_0D00170
DNA repair and recombination proteins [BR:
cot03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
CORT_0D00170
Check point factors
HRAD17(Rad24)-RFC complex
CORT_0D00170
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
AAA_14
AAA_3
AAA_22
AAA_16
Rad17
RuvB_N
nSTAND3
Viral_helicase1
AAA_19
DNAX_ATPase_lid
RCF1-5-like_lid
Mg_chelatase
AAA_assoc_2
FtsK_SpoIIIE
ATPase_2
NTPase_1
bpMoxR
AAA_5
AAA_33
Motif
Other DBs
NCBI-GeneID:
14539956
NCBI-ProteinID:
XP_003869003
UniProt:
H8X5V2
LinkDB
All DBs
Position
4:complement(9687..10649)
Genome browser
AA seq
320 aa
AA seq
DB search
MSKTLELPWVEKYRPHVLDDIVGNEETIERLKVIVQDGNMPNMIISGLPGIGKTTSIHCL
AYELLGKEHYHQATLELNASDDRGIDVVRNKIKQFAQTKISLPPGRTKIIILDEADSMTP
GAQQALRRTMEIYSNTTRFAFACNQSSKIIEPLQSRCAILRYNKLSDEEVLKRLLDIIKL
ENVQYNNEGLQALIFSAEGDMRQAINNMQSTVAGFGFVNDVNVFKIVDQPHPLVIQNILS
NCLQGDVDKAIGLLDGLWHKGYSAIDIVTSTFKVAKTIPNVDESKRLNMIKEIGFVHMRV
LEGVGSYLQLCGMYAKICDL
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaaacattagaactcccttgggtggagaagtataggcctcatgttttggatgat
atagtgggaaacgaggaaacaatagaacggttgaaggttatagtgcaagatggcaacatg
cctaacatgattattagtggactaccaggaattggaaagaccacgtctattcactgtttg
gcgtatgaattgttaggcaaggagcactaccaccaagccacgttggagctcaatgcttca
gatgatagaggtatcgatgttgttagaaacaagataaagcagtttgctcagacaaagatc
ctgcttccaccaggtaggacaaagattatcattttggatgaagcagactccatgacccct
ggtgcccaacaggcattgagacggactatggaaatttactcaaacactactagatttgca
tttgcttgtaaccaatcactgaaaataatagaaccactacaatcgcgttgtgctatttta
aggtataacaaattatcagacgaagaggtgttgaagagactattggatattattaagttg
gagaatgtgcagtataacaatgaaggtttgcaggcattgattttcagcgcagaaggggac
atgagacaagcgattaacaatatgcagagtaccgttgccggatttggctttgtcaatgat
gttaatgtatttaaaattgttgatcaaccacacccacttgtgattcagaatattttgtca
aattgtttgcaaggagatgtggataaagcaattggcttattggacggtctttggcacaaa
gggtattcggcgattgatatagtgacactgacgtttaaagtggccaaaacgatccccaat
gttgacgaactgaaacgattaaacatgattaaggaaattgggtttgtccatatgagagtg
ttggagggcgttggaagttacttacagctttgcgggatgtatgcaaagatatgcgattta
tga
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