Candida orthopsilosis: CORT_0D00190 Help Entry CORT_0D00190      CDS       T02488                                  Name (RefSeq) Rpo21 protein   KO K03006   DNA-directed RNA polymerase II subunit RPB1 [EC:2.7.7.6] Organism cot  Candida orthopsilosis Pathway cot03020   RNA polymerase cot03420   Nucleotide excision repair Brite KEGG Orthology (KO) [BR:cot00001]  09120 Genetic Information Processing   09121 Transcription    03020 RNA polymerase     CORT_0D00190   09124 Replication and repair    03420 Nucleotide excision repair     CORT_0D00190  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:cot03021]     CORT_0D00190    03400 DNA repair and recombination proteins [BR:cot03400]     CORT_0D00190 Enzymes [BR:cot01000]  2. Transferases   2.7  Transferring phosphorus-containing groups    2.7.7  Nucleotidyltransferases     2.7.7.6  DNA-directed RNA polymerase      CORT_0D00190 Transcription machinery [BR:cot03021]  Eukaryotic type   RNA polymerase II system    RNA polymerase II     Core subunits      CORT_0D00190 DNA repair and recombination proteins [BR:cot03400]  Eukaryotic type   SSBR (single strand breaks repair)    NER (nucleotide excision repair)     TCR (transcription coupled repair) factors      DNA-directed RNA polymerase II complex       CORT_0D00190 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  RNA_pol_Rpb1_1 RNA_pol_Rpb1_5 RNA_pol_Rpb1_2 RNA_pol_Rpb1_6 RNA_pol_Rpb1_7 RNA_pol_Rpb1_3 RNA_pol_Rpb1_4 RNA_pol_Rpb1_R Motif Other DBs NCBI-GeneID:  14539958 NCBI-ProteinID:  XP_003869005 UniProt:  H8X5V4 LinkDB All DBs Position 4:complement(11508..16706) Genome browser AA seq 1732 aa AA seqDB search MSRTFPFSNAPLRSVKEVQFGLLSPEEVRAISVAKIEYPETMDQATKRPREGGLNDPRLG SIDRNFKCQTCGEDMAECPGHFGHIELAKPVFHIGFIAKIKKVCESICMHCGKLLLDESN PLMAQAIKIRDPKKRFNAVWSICKTKMVCETATSEEEMNDHPTRGGCGHTQPTIRRDGLK LWGTWKHNKNFEENDQPERRLLTPSEILNVFKHISPEDCYRLGFNEDYARPEWMLITVLP VPPPPVRPSIAFNDTARGEDDLTFKLADIIKANINVQRLEIDGSPQHVISEFEALLQFHV ATYMDNDIAGQPQALQKTGRPIKSIRARLKGKEGRLRGNLMGKRVDFSARTVISGDPNLD LDQVGVPISIAKTLTYPEIVTPYNIHKLTELVRNGPNEHPGAKYVIRDTGDRIDLRYNKR AGDIALQYGWKVERHLMDDDPVLFNRQPSLHKMSMMAHRVKVMPYSTFRLNLSVTSPYNA DFDGDEMNLHVPQSPETRSELSQICAVPLQIVSPQSNKPVMGIVQDTLCGIRKMTLRDIF IEYDQVMNMCYWIPNWDGVIPPPAIIKPKPLWSGKQILSMAIPKGIHIQRFDGGRDLLSA KDTGMLIVDGEIMFGVVDKKTVGATGGGLIHTVMREKGPQVCAQLFSSIQKVVNFWLLHN GFSIGIGDTIADASTMKDITKTIQEAKQKVQEIILDAQHNKLDPEPGMTLRESFEHNVSR VLNQARDTAGRSAEMSLKDLNNVKQMVTSGSKGSFINISQMSACVGQQIVEGKRIPFGFA DRSLPHFTKDDYSPESKGFVENSYLRGLTPQEFFFHAMAGREGLIDTAVKTAETGYIQRR LVKALEDIMVHYDGTTRNSLGDIIQFIYGEDGVDATQVEKQSVDTIPGSDESFERRYRID LLEENGSISESLLESGKEIQGDVKLQKLLDEEYNQLLEDRRYLRDVCFPNGDFSWPLPVN LRRIIQNAQQIFHNGRYKASDLKLDEIVNGVRDLCTKLLVVRGNTKLAKEAQENATLLFQ CLVRSRLASRRVIEEFKLNRSSFDWVLGEIETQFQKSIVHPGEMVGVVAAQSIGEPATQM TLNTFHYAGVSSKNVTLGVPRLKEILNVAKNIKTPALTVYLDPEVASDIELAKIVQSSIE HTTLKNVTSSTEIYYDPDPRTTVIEEDYDTVEAYFAIPDQKVEESIEKQSPWLLRLELDR AKMLDKQLTMAQVAEKISQNFGEDLFVIWSDDTADKLIIRCRVVRDPKTLDEDADAEEDQ ILKRIEAHMLESISLRGIPGITRVFMMQHKVSKPDETGEFKQGKEWVLETDGVNLADVMA VPGVDSTRTYSNDFIEILSVLGIEATRSALYKEILNVIAFDGSYVNYRHMALLVDVMTSR GHLMAITRHGINRSDTGALMRCSFEETVEILLDAAAAAELDDCKGISENVMLGQMAPLGT GAFDVMVDDKMLQQAPANVAMEVIAEDGGATPYREAEMQDDRIQIDESAGFSPIHQAPTS DGMNGGLTSYGGQPTSPSATSPFSYSTSPSYGGTSPAYGGTSPGYGYSPTSPSYSPTSPS YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPTY SPTSPSYSPTSPTYSPTSPQYSPTSPQYSPTSPSYSPGSPGYKPESPKKEEK NT seq 5199 nt NT seq  +upstreamnt  +downstreamnt atgagtagaacttttccgttttcaaatgctccccttcggtctgtcaaggaagtccagttt ggtttgctttcccctgaggaagtaagagccatttcagttgccaaaattgaatatcccgaa actatggatcaagcaaccaagagacctcgtgaaggtggtcttaacgatccaaggttgggc tctatcgacaggaatttcaagtgtcaaacttgcggtgaggatatggctgagtgtccgggt cattttggacacatcgaattggccaaacctgtatttcatataggttttatcgccaagatt aaaaaagtatgtgaatccatttgtatgcactgtgggaagttgttgttggatgagctgaac cccttgatggcacaagcgattaagattagagatccaaaaaagagattcaatgcggtgtgg agtatatgtaagactaaaatggtttgtgagaccgccaccagtgaggaggagatgaacgat catcctaccagaggaggctgtggtcatacacaaccaactattcgtagagacggattgaag ttgtggggaacctggaagcacaataaaaactttgaagagaatgatcaaccagaacgtcgt ttgttgacgccatcggaaattctcaacgtgtttaagcatattagtccagaggattgctat agattgggattcaacgaggactatgctaggcccgaatggatgttgattactgttttgcca gttcctccaccacctgtgagaccatcaattgcattcaatgatacggcaagaggagaagat gatttgacattcaaattggcagacataataaaagcaaacatcaatgttcaacgtttggaa atcgatggttctccacaacacgtcattagtgagtttgaggcattgcttcagtttcacgtg gccacctacatggacaatgacattgctggtcaacctcaggctttgcaaaaaacaggacgt ccaattaagtcaatcagagcaagattgaagggcaaagagggtagattgagaggtaatttg atgggaaagagagtggacttttctgcccgtacagtcatttctggtgatcctaacttggac ttggatcaagttggtgttcctatatccattgcaaagacattgacctatccagaaattgtc acaccttacaacatccacaagttgactgagttggtcagaaatggtcccaacgaacatcct ggtgcaaaatatgtgatcagagatacgggtgatcgtattgatttaagatacaataagaga gccggtgatattgctttacagtacggatggaaggttgaacgtcatttgatggacgacgat ccagttttattcaaccgtcaaccttcgttgcataaaatgtctatgatggcgcatagagtt aaggttatgccttattctacattcagattgaacttgtcagttacctcgccttataatgca gatttcgatggtgacgaaatgaacttgcatgtaccacagtccccagaaacgaggtcggag ttgtcacagatttgtgctgttcctcttcaaatcgtctcgccacaatctaacaaaccagtc atgggtatcgtgcaagataccttatgtggtattcgaaaaatgacattgagagacattttc atcgaatatgatcaagttatgaatatgtgttattggattcctaactgggatggtgttatt ccacctcccgcaataataaaaccaaagccattgtggtcaggtaagcaaatattgtcaatg gccataccaaaaggtatccatattcaaagattcgatggtggaagagacttgttgagcgca aaggatactggtatgttgattgttgatggtgaaatcatgtttggtgttgttgataaaaag acagttggtgcaactggtggcggtttgattcacacagtgatgagagaaaaaggacctcaa gtttgtgcacagttgtttagttccattcaaaaagtggtcaacttttggttgttgcataat gggttcagtatcggtattggtgatactattgccgatgccagcaccatgaaggatatcaca aaaacaattcaagaagctaaacaaaaagtgcaagagattatcctcgatgctcagcataac aagttggaccccgagccaggtatgactttgagagaatcttttgaacacaatgtatctcgt gttttgaatcaagcgcgtgatactgctggtcgttctgctgagatgagtttgaaggatttg aataacgtgaagcagatggttacctccggttccaagggttcatttatcaacatttcgcag atgtcggcatgtgtcggtcagcaaatcgtcgaaggaaaaagaattccttttggttttgct gaccgttcattgcctcatttcaccaaagatgattattcccccgaatcaaagggttttgtt gaaaactcttatttgagaggtttaacgccacaagagtttttcttccatgcaatggctggt agagaaggtcttattgatactgctgttaagactgcagaaacgggttatatccaacgtcgt ttggtcaaggctttggaagatattatggtgcactatgatggtacaactagaaactcttta ggagatatcattcagttcatctatggtgaagacggtgtcgatgccactcaagttgaaaag caatctgttgatacgatccctggatctgatgaaagtttcgaacgtagatacagaattgat ttgttggaagagaatggatcaatttcagagtcattgttggaatcaggaaaggaaatacaa ggtgatgttaagttgcaaaaactattggatgaagagtataatcaattgcttgaagataga aggtacttgagagatgtttgcttccccaatggtgatttcagctggcctttgccagtcaac ttgcgtcgtattatccaaaatgctcaacaaatttttcacaatggtcgttataaagcatct gatttgaaattggatgaaattgtgaatggtgttcgcgacttatgcacaaagttgttagtc gtgagaggaaacacaaaattagcgaaagaggctcaagagaatgccaccttgttattccaa tgtttggttaggtcaagattggcttcgcgtagagttattgaagaattcaagttgaacaga tcctcctttgattgggtattgggtgaaatcgaaactcaattccaaaaatcgattgtgcac cctggtgaaatggttggtgttgttgctgctcaatccattggtgagccagctactcaaatg acgttgaatacattccattatgctggtgtctcttcaaagaatgtcaccttgggtgttcca agacttaaagaaattttaaacgttgcaaagaacattaagacaccggctttgacggtatac ttggacccagaggttgcttccgatattgaattggccaagattgtgcaatcgtctattgaa catactactttgaagaatgtcacttcatcaacagagatttactacgatccagacccaaga accaccgttattgaagaggattatgacacggttgaggcatattttgctattccggatcaa aaggttgaggaaagcattgaaaagcaatcaccttggttgttgaggttggagcttgatcgt gccaagatgttggacaaacaattgacaatggcacaggtagcagaaaagatctcacaaaac tttggtgaagatttgtttgttatttggtcagatgatactgccgacaagttgattattcgt tgtagagttgtcagagatccaaaaactttggatgaagacgctgatgcagaagaagatcaa attttgaagcgtattgaagcccacatgttggagtcaatttcgttgagaggtattcctggt attactagagtgtttatgatgcaacacaaggtgagcaaaccagatgagaccggtgaattc aaacaaggtaaagaatgggtgttagaaactgatggtgttaacttggccgatgtcatggca gttcccggggttgattcaacccgtacctattccaacgactttattgagattttgtcagtc ttgggtattgaagcgactagatctgctttgtataaggagattttgaacgttattgcattc gatggttcttatgtcaactatcgtcatatggctcttttggttgatgttatgacgtctcgt ggacacttgatggcaatcacccgtcatggtatcaacagatccgatactggtgccttgatg cgttgttcttttgaggaaacagtggaaatcttattagatgctgctgccgctgcagagttg gatgattgtaagggtatttcagagaatgttatgttgggacaaatggcaccattgggaacc ggtgcgtttgatgttatggttgacgacaaaatgttgcaacaggctccagccaatgttgcg atggaggttattgcagaagatggaggtgctacaccatatagagaagccgagatgcaagat gacagaattcaaattgacgaaagtgcaggtttctctccaattcatcaagcaccaacttca gatggtatgaatggaggcttgacatcttatggtggacaaccaacctcaccaagtgccaca tctccattcagctactcgactagtccaagctatggaggaacgagtccggcttatggtggc acaagtccaggatatggctactctccaacgtcgccatcgtattcgcctacttctccaagc tactcgccgacatcgccaagctactcgccaacatctccatcatactcgccaacatcgcca tcatactcacctacatctccaagttactcaccaacatcgccatcatactcgcctacatct ccaagttactcaccaacatctccaagttattcaccaacgtcgccaagctactcaccaaca tcgccatcatactcgcctacttctccaagctactcgccaacatcgccatcatactcgcca acatctccaagttactcacctacgtctccaagttattcaccaacgtcgccatcatactcg cctacatccccaagttactcaccaacatctccatcatactcaccaacctcgcctacctac tcaccaacatctccatcgtattcaccaacatcgcctacgtattcacctacgtcccctcaa tactcaccaacgagtcctcagtactcacctacttctccaagttattctccaggctcacct ggttacaaacctgaatcgccaaagaaggaggagaagtaa

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