Lodderomyces orthopsilosis: CORT_0D00340
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Entry
CORT_0D00340 CDS
T02488
Name
(RefSeq) Smd1 protein
KO
K11087
small nuclear ribonucleoprotein D1
Organism
cot
Lodderomyces orthopsilosis
Pathway
cot03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cot00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
CORT_0D00340
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cot03041
]
CORT_0D00340
03032 DNA replication proteins [BR:
cot03032
]
CORT_0D00340
Spliceosome [BR:
cot03041
]
Complex A
U1 snRNP components
Sm proteins
CORT_0D00340
U2 snRNP components
CORT_0D00340
Complex B
U1 snRNP components
CORT_0D00340
U4/U6.U5 tri-snRNP components
CORT_0D00340
Complex C
U2 snRNP components
CORT_0D00340
DNA replication proteins [BR:
cot03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
CORT_0D00340
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
SM-ATX
DUF5030
Motif
Other DBs
NCBI-GeneID:
14540143
NCBI-ProteinID:
XP_003869020
UniProt:
H8X5W9
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All DBs
Position
4:40682..41032
Genome browser
AA seq
116 aa
AA seq
DB search
MKLVRFLMNIPNSTNQPVTVELKNGNIINGTLLSCTPSMNLNLKNVKLQQKYQDPILLQY
INVRGNQIRQILLPEDLNIDSVLEKSQTKIKGQGAGPSAKPVKRGGLRGRGRGRGR
NT seq
351 nt
NT seq
+upstream
nt +downstream
nt
atgaaattggtacgatttttgatgaacatacccaactcaactaaccaaccagttacagtt
gaattgaagaatgggaacataataaatgggacgcttttgtcatgtacgccgctgatgaat
ctaaacttaaagaatgttaaactacaacaaaagtatcaagatccaatcttgctacaatat
attaatgttagaggaaatcagataagacagattttgctacctgaagatttaaacattgac
agtgtgttagagaaatctcaaacgaagataaagggccaaggggccggtccaagtgcaaaa
ccagtcaaacgaggaggattaagaggaagaggacggggaagagggcgttag
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