Lodderomyces orthopsilosis: CORT_0D00970
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Entry
CORT_0D00970 CDS
T02488
Name
(RefSeq) Yta6 protein
KO
K22766
fidgetin-like protein 1 [EC:5.6.2.-]
Organism
cot
Lodderomyces orthopsilosis
Brite
KEGG Orthology (KO) [BR:
cot00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cot03036
]
CORT_0D00970
03400 DNA repair and recombination proteins [BR:
cot03400
]
CORT_0D00970
Chromosome and associated proteins [BR:
cot03036
]
Eukaryotic type
Centrosome formation proteins
Other centrosome associated proteins
CORT_0D00970
DNA repair and recombination proteins [BR:
cot03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
CORT_0D00970
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
Vps4_C
AAA_lid_3
RuvB_N
AAA_16
AAA_22
TIP49
AAA_5
RNA_helicase
AAA_14
ORC-CDC6-like
NPHP3_N
Mg_chelatase
AAA_2
IstB_IS21
nSTAND3
AAA_25
nSTAND_NTPase5
DUF815
AAA_33
AAA_7
AAA_24
AAA_28
NACHT
Parvo_NS1
PhoH
Motif
Other DBs
NCBI-GeneID:
14540232
NCBI-ProteinID:
XP_003869082
UniProt:
H8X4K3
LinkDB
All DBs
Position
4:153800..155965
Genome browser
AA seq
721 aa
AA seq
DB search
MFRKKPAQVTLEELEQTYNDCCNETIKNLTLEEENNVDDALKGWKSLHTTLLYKLDLFDK
YSTKLEPQEKTLLNSLKSIRDENVKHLIRVQLRLDEKNRKLKREANGAPPPPPPRGIRDK
TVPSLRVSSPSSSFGSSAPPSRHLMKSLRTHSNGGAIKTSSTRLAHESVQQASQAASKSW
QKPAKYKFEMSNTPKVEVSSYFADFDQDTYTTKGDNWEKVDSSRSSSGFSENFDEPNLID
MDDAAASKDVYRSMDDLTIKMVSDSPPKATQPRNDKGMTPIEHISKSTTDVRPKPKGPYV
YNKPKPLNLHKLMQQSKKPTPASTPATKPKSTITYNYVKPKTTQVKTRPATDGAANGAAK
KPVPKKQEPEEEKESINSPTMDDLLSGYDGDKFESADPVYALTTEKEQDALIGSVRGIDP
IAAKNILNDVVVRGDEVYWDDIVGLEGAKSSLKEAVVYPFLRPDLFKGLREPTRGMLLFG
PPGTGKTMLARAVATESQSTFFSISSSSLTSKYLGESEKLVKALFLLARKLAPSIVFMDE
IDSILSSRSEGENESTRRIKNEFLVQWSELSSAAAGRESGEDVSRVLILGATNLPWSIDE
AARRRFVRRQYIPLPESEARKHQIMKLLQYQKHTLSDEDYDKLIKLTEGFSGSDITALAK
DSAMGPLRSLGDKLLSTPTDQIRPISLEDFENSLKYIRPSVSKEGLQEYEDWAEKFGSSG
A
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atgttcagaaagaagccggctcaagttacgttggaagaacttgaacaaacatataacgat
tgttgtaacgagacgattaagaatttgacgttagaagaggaaaacaatgttgacgatgca
ttaaaaggatggaagagtctacatacgactttgttatacaagttggatctattcgataaa
tacagcaccaagttggagccccaggagaaaactttattaaatagtctaaagagtatacgt
gacgagaatgtcaaacatttgataagagttcagcttaggttagatgaaaagaatcgaaaa
ttgaaacgggaagcaaatggtgcaccaccacctcctcctccaagaggcatcagagacaaa
acggtgccatcgttgagggtaagtctgccttccagttcttttggaagttcagcaccacca
ctgagacatttgatgaaatcattacgtacacattcaaatggaggagcaattaagacatca
agtacgagactagcacatgaatctgttcaacaagcctctcaagcagcatcaaaatcttgg
cagaagccagctaaatacaagtttgaaatgtcaaatacaccaaaggttgaagtctcgagc
tactttgctgatttcgatcaagatacatacactacaaagggtgataattgggagaaagtt
gactcatcgagatcgtcgtcaggattttcggaaaattttgatgaacctaatttaatagat
atggatgatgcagcagcatcaaaagatgtataccgatctatggatgatttgacaatcaag
atggtttcagatagtcctccaaaagcgacacaaccaagaaatgacaaaggtatgactccc
attgagcatatttcaaagagcactaccgatgtgcgcccaaaacctaagggaccatatgtt
tacaataaacccaagccattaaacttgcacaagttaatgcagcagctgaagaaacctacg
cctgcctctactcctgcaacaaagccaaaatcgacaattacatacaattacgtcaaacct
aaaactacgcaagtaaaaactcgaccagcaaccgatggagccgccaatggcgcagcaaag
aaacctgtacctaagaagcaagaaccggaagaagagaaggagtcaataaatagtccaaca
atggatgatttactaagcggttatgacggggacaaatttgaatcagcagatccagtatat
gcattaacgacagagaaggagcaagacgctttgattggatccgttcgtggaatcgatcct
atagcagccaaaaatattttaaatgatgttgtcgtacgtggtgatgaagtttattgggat
gatatagttgggttggaaggtgcaaaaagttccttgaaggaggctgtagtgtatccattc
ttgcggcctgatttgtttaaaggcttaagagaaccaacgaggggtatgttgctttttggc
cctccgggaacaggaaaaacaatgttggccagagccgttgcaacggaatcacagtctacc
tttttcagtatcagctcgtcatcattaacatcaaagtatttaggagagtctgagaagtta
gtcaaggcattgtttctattggcaaggaagttggcgccctcaatagtttttatggatgag
attgattccatcttatcttcgagatcagaaggagaaaatgaaagtacaagacgtatcaag
aatgaatttcttgttcaatggtcagaactttcgagtgctgcagctggtcgtgaatctggt
gaggatgtgtcacgagtccttattcttggagccaccaatttaccatggtccattgatgaa
gcagcaaggagaagatttgtacgtcgacaatatatccccttacccgaatccgaagctaga
aaacatcaaatcatgaagttattgcagtatcaaaagcacacattatctgacgaagattat
gacaagttgatcaagttgactgaagggttcagtggtagtgacataacagcattggcaaaa
gattccgccatgggtccattaagatcgctaggtgacaagttgttgctgactcccaccgac
caaattagacctatcagtttggaagatttcgaaaacagtttgaagtatattagaccaagc
gtatcaaaagaaggacttcaagaatatgaagattgggcggaaaaatttggatccagtggc
gcataa
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