Candida orthopsilosis: CORT_0D01100
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Entry
CORT_0D01100 CDS
T02488
Name
(RefSeq) Prp4 protein
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
cot
Candida orthopsilosis
Pathway
cot03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cot00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
CORT_0D01100
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cot03041
]
CORT_0D01100
Spliceosome [BR:
cot03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
CORT_0D01100
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_WDHD1_1st
EIF3I
Beta-prop_TEP1_2nd
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
Beta-prop_EML
NBCH_WD40
Beta-prop_RIG_2nd
Beta-prop_TEP1_C
WD40_MABP1-WDR62_1st
PRP4
Beta-prop_IFT140_1st
Beta-prop_HPS5
Beta-prop_WDR75_1st
WDR90_beta-prop_4th
Beta-prop_IFT122_1st
Beta-prop_SPT8
Beta-prop_SCAP
Beta-prop_DCAF4
Beta-prop_Vps41
WD40_RFWD3
Beta-prop_WDR75_2nd
PQQ_3
Beta-prop_DCAF12
Motif
Other DBs
NCBI-GeneID:
14540216
NCBI-ProteinID:
XP_003869095
UniProt:
H8X4L6
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All DBs
Position
4:188765..190120
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AA seq
451 aa
AA seq
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MQYNEIPVINDKPIPEEDELVRKQLKELGQPVFINGEDDHDRRERLANLVNGGALQSDDA
QSEDEEKEEEEEEEVFYTPGSAELYDVRCQILDQSLVKASQRIQQQRQVLQNNPEFTTFL
KKRRTINSKLADIELYGSQVIHGNTRAISSVRYSSSGDLIACGTWNGSVHVLNSNDLNPA
VKLLNGQHTEKVGSADWQVNDTTLITGGSEGSINVWNITDSDEIIKPELSIKEAHLNRIT
NTLFHPINNFAISTSFDQTWKLWDIKKEAELYQQEGHSKEVYSGAVHPDGSLFLSGGLDG
IIYVWDLRSGRALMPLQKHIQGVYSLDWSPNGYHFASGSGDCSVKIWDMRKLDHSGDEIF
SIPAHTKLVSDVRFHCGKVGVNEDGNGVIGSFLVSSSYDGSVKVWSADNWILVNTLKGHN
EKVMSCDVTSDENSGVRVVSSGWDRTVKLWQ
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atgcaatacaacgaaataccagtcatcaacgacaagccaattcctgaagaggatgagctt
gtacgtaagcagctaaaggagttggggcaacctgtattcatcaatggggaagatgatcat
gatcgacgagaaagattagccaatttagttaatggaggtgccttgcaatcagacgatgca
caaagcgaagatgaagagaaagaagaggaagaggaggaagaggtattctatacaccggga
tcagcagaactatatgatgtgagatgtcagattctcgatcaatctttggtcaaagcatca
caacggatccaacaacaaagacaagtgctacaaaataaccctgagtttactacattttta
aagaaaaggcgaacgataaattcaaagttagctgacattgaactatacggatcccaggtt
atccacggaaatacaagagccatatccagcgtgaggtactcttcaagtggagacttaatt
gcatgtggaacatggaatggatcagtacatgtcttaaactcaaacgacttgaatcccgct
gtaaagttgctaaatggacaacacacagaaaaagttggcagtgcagattggcaggtaaat
gatactactttaatcacaggagggagcgagggcagcatcaatgtgtggaatattacagat
tcggacgagataattaaacctgaactttcaatcaaagaggcacatttgaatagaataacc
aacactttatttcatccgattaataactttgcaatctcaacttcatttgatcaaacatgg
aagttgtgggatataaagaaagaggctgagttatatcaacaagagggtcactcgaaggaa
gtatacagtggtgcagtccatccagatgggtccctttttctttcaggcggattggatggt
attatttacgtttgggatttgagatcgggaagggcactcatgccgcttcaaaagcatata
cagggagtttacagtctcgattggtctccaaatggatatcattttgctagtggatctggg
gattgttcggtgaaaatttgggatatgcggaaattagaccattctggtgatgagatattt
tcaataccggcgcatacaaaactagttagcgatgtgaggtttcattgtggtaaggtcggg
gtaaatgaggatggaaatggcgtcattggctcgtttttggttagtagctcttacgacggg
agcgtaaaggtctggtcggcagataattggattttagttaatacattgaaagggcataat
gagaaggtgatgagctgtgatgttactagtgatgaaaatagtggagtcagagttgtaagt
agtggctgggaccgcacagtgaagctatggcaatag
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