KEGG   Candida orthopsilosis: CORT_0D01430
Entry
CORT_0D01430      CDS       T02488                                 
Name
(RefSeq) Cdc40 protein
  KO
K12816  pre-mRNA-processing factor 17
Organism
cot  Candida orthopsilosis
Pathway
cot03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cot00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    CORT_0D01430
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cot03041]
    CORT_0D01430
Spliceosome [BR:cot03041]
 Complex C
  Other components
   Step II factors
    CORT_0D01430
SSDB
Motif
Pfam: WD40_Prp19 WD40 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_EML_2 EIF3I WDR55 Beta-prop_RIG_2nd Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd Beta-prop_EML ANAPC4_WD40 Beta-prop_TEP1_2nd WD40_RFWD3 Beta-prop_WDR90_POC16_2nd Beta-prop_SPT8 WDR90_beta-prop_4th Beta-prop_TEP1_C Beta-prop_WDR75_1st Beta-prop_EIPR1 WD40_MABP1-WDR62_1st Beta-prop_IFT122_1st Beta-prop_DCAF4 Beta-prop_IFT140_1st Beta-prop_WDR75_2nd Beta-prop_SCAP NOL11_N B-prop_COPA_B_2nd
Other DBs
NCBI-GeneID: 14540683
NCBI-ProteinID: XP_003869129
UniProt: H8X4Q0
LinkDB
Position
4:240454..241788
AA seq 444 aa
MSLVQGYSSSEEEIEEKTDGVNHKRQKTSTSIFQEIACPTTSDESFQQSKLKEAKAKAKA
KELKLRRKMNGGDPWSSIRSEEVQVFQPGEPVQLQEEDDEELDKFKPTSQFVGSNELDYQ
GRTFMHIPNELTKQAPGDQECFVPKSVIHTFPRAHPKGVNKLQFFPQSGHLMLSCGNDGS
IKLWSVYDAFELLRIYKGHNLAVKDISFNSTGDKFLSCGFDKVVRLWNTETGEVIKTIET
TSTPNVVRFNPSNESEFIVGLSNHKIEHYDLVAIHNPIQVYDHHIGAINDLLVDSETFIS
TSDDKSVRVWKWQINIPIKVISDPSQFSTPSAKKHPKANYIALQSMDNSVKVIHSTGKYK
WNKNKLFKGHQSAGYGIEIEFSPDGKILMSGDSRGYAVFWDWQSKKIVNKLKLSTLPIKC
ITFHPLETSKVAIAGTSGDIYYCD
NT seq 1335 nt   +upstreamnt  +downstreamnt
atgtcgctagtgcaaggatactcaagctcggaagaggagatagaagagaagacggatggg
gtaaatcacaaaagacagaaaactctgacgtctatatttcaagagattgcttgcccaaca
acttctgatgagagctttcaacaatcaaagctcaaagaagccaaagccaaagccaaagca
aaagaattgaaactacgacgcaaaatgaatggaggtgatccctggtcatcaatccgttca
gaagaggtacaagtgtttcaaccaggtgagccagtgcaattacaagaggaagatgatgaa
gagcttgataaattcaaaccaacttcccaatttgttggatcaaatgagcttgattaccaa
ggtaggacattcatgcatataccgaatgagctcacaaagcaagcacctggcgatcaagaa
tgctttgttcccaaactggtgattcacacattccccagggcgcatccaaaaggtgtcaat
aaattacaattcttcccacaatctgggcaccttatgctatcttgtgggaacgacggatcg
ataaagctatggtccgtgtatgatgcatttgaactattgcgtatttacaagggccataat
ttggcagtcaaggatatatcatttaactccaccggtgacaagtttctcagttgtgggttt
gataaagttgtccgtttatggaataccgaaactggcgaagttataaaaacaattgaaacc
acctcaacaccaaatgtagtcagattcaatccaagcaacgagtctgagtttattgttggc
ttactgaatcataaaatagaacactacgatctagtagctattcataatccaatacaagta
tacgatcatcatattggtgccataaatgatctacttgtggattcagaaacattcatctcc
acttccgatgacaaatcagttcgggtatggaaatggcaaatcaacattccaataaaggtc
atttccgatccttcgcaattttcaactccatcagcaaagaagcatccaaaagcaaactac
attgctttacaaagtatggataatagcgtcaaagtgatccactcaacagggaaatacaaa
tggaacaaaaataagcttttcaaggggcaccaaagtgcaggatacggtattgaaatcgag
ttctctcctgatggtaagatcctaatgagtggtgattcgcgagggtatgcagtattttgg
gattggcaaagcaagaaaatcgtaaacaagttaaaattgagcacattgccgatcaaatgt
atcactttccacccattagagacaagtaaagtagccatagctggaactagtggtgatata
tactactgtgattaa

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