Candida orthopsilosis: CORT_0D01890
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Entry
CORT_0D01890 CDS
T02488
Name
(RefSeq) Chr1 DEAD-box ATP-dependent RNA helicase
KO
K14779
ATP-dependent RNA helicase DDX52/ROK1 [EC:
5.6.2.7
]
Organism
cot
Candida orthopsilosis
Brite
KEGG Orthology (KO) [BR:
cot00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cot03009
]
CORT_0D01890
Enzymes [BR:
cot01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
CORT_0D01890
Ribosome biogenesis [BR:
cot03009
]
Eukaryotic type
90S particles
Helicases
CORT_0D01890
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CMS1
Utp25_C
AAA_22
Motif
Other DBs
NCBI-GeneID:
14540000
NCBI-ProteinID:
XP_003869174
UniProt:
H8X4U5
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All DBs
Position
4:328502..330145
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AA seq
547 aa
AA seq
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MDIFRILSRGASLKKSRDVTTDYALPSAKQNQSQKHKEESILNQVEKETDFFHTRKHTKQ
VPEKEVELESPEQQKEDEAPPLELKDEDDAKKFRNLHRSKVTGDDIPIPIGSFEDMIGRF
KIDRQLLSNLIDNDFIGPTAIQCESIPITLSSRDLIACAPTGSGKTLAFLIPLIQQLLKK
QVEKNYGVRGLIISPTNELAVQIFQELETLVRGKKLTIGILSKQLASKLNNDIVKASKYD
IIVSTPLRLIDIVKNEKIDLSKVDQLVIDEADKLFDHGFAEQTDEILNHLTNTKIRKSMF
SATIPSGVEEMAHSIMKDPIRVIIGHKEAASSTIDQKLIFTGNEEGKLLAIRQMVQNGEF
KPPIIIFLQSITRAKALFHELVYDKLNVDVIHAERTPKQRDEVIKRFKNGDIWVLITTDV
LARGVDFKGVNLVINYDVPQSAQAYVHRIGRTGRGGRAGRAVTFFTKEDDKAVKPIINVM
KQSGCKSGFSEWMENMGKLSKKEKKNVKTHEVKRKKISTVPKLIKQKRKQKQEMIAASKR
RKQAESN
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atggatatctttagaattctaagcagaggagcttctttaaagaaatctagagatgtgact
actgattatgccctcccttcagctaagcaaaaccaaagtcaaaaacataaagaggaatca
atcttaaaccaagttgagaaggagactgatttctttcacacaaggaagcacacaaaacaa
gtaccagaaaaggaggttgaacttgaatctcctgagcaacagaaagaagatgaagcgcct
ccattggagttgaaagatgaagacgatgccaaaaagtttagaaatctacatagatctaaa
gttactggtgatgacattcctatccctattggttcatttgaagacatgattggcaggttc
aaaattgacaggcaacttttatctaatcttattgataatgactttattgggcccacggct
attcaatgtgaatcaataccgataactttatccagtagagatttgattgcttgtgctcca
acaggttcaggtaagacattggcatttttgattcccttgattcaacagcttctcaaaaaa
caagttgaaaaaaactatggagtgagagggttgatcatttctcctacaaatgaattagca
gtacaaattttccaagaattggaaactttggttaggggaaagaaacttaccattggtata
ttatcaaaacaacttgcaagtaagttgaataacgatatcgtcaaagcatccaagtacgac
atcatcgtatccaccccattacgtttgatagatatcgtcaaaaatgaaaagattgattta
tccaaagtagatcaattggttattgatgaagctgataaattattcgatcatggatttgcc
gagcagactgatgaaatattgaatcatttaacaaataccaagatacgaaaatcaatgttt
tctgcaaccatcccatctggagttgaagagatggcacattcaatcatgaaggacccaatt
agggtaatcattggtcataaagaagctgcaagtagcacaattgaccagaagttgattttt
acggggaatgaagaaggtaagttgttagctattagacaaatggttcaaaatggggaattc
aaacctccaatcataatatttttacaatcaatcaccagagctaaagcattgtttcatgaa
ttggtgtatgataaattgaatgttgatgtgatacatgcggaaagaacaccaaagcaaaga
gacgaggtgattaagcgattcaaaaacggtgatatttgggttcttataacaactgatgtg
cttgctagaggtgtcgacttcaaaggtgtgaacttggtcatcaactatgatgtcccgcag
agtgctcaagcatatgtgcatagaataggtagaacaggaaggggtggaagagctggtaga
gcagtcacattttttacgaaggaagatgataaagcagtcaaaccaataatcaatgtcatg
aagcaatcaggttgcaagtccggattcagtgaatggatggaaaatatgggcaaacttagc
aaaaaggaaaagaaaaacgtcaagactcacgaagtcaaacgaaagaagatcagtacagtt
cccaagttgataaagcaaaagagaaagcaaaaacaagaaatgatagctgcttcaaaaaga
agaaaacaagctgaaagcaattag
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