Lodderomyces orthopsilosis: CORT_0D02900
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Entry
CORT_0D02900 CDS
T02488
Name
(RefSeq) Nup49 protein
KO
K14307
nucleoporin p58/p45
Organism
cot
Lodderomyces orthopsilosis
Pathway
cot03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
cot00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
CORT_0D02900
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cot03019
]
CORT_0D02900
Messenger RNA biogenesis [BR:
cot03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
CORT_0D02900
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nucleoporin_FG
Rh5
ENOX1
NUP58_M
DUF7201
WIT1_2_N
DUF8810
CCDC178_CC1
Nup49_C
BLOC1_2
Motif
Other DBs
NCBI-GeneID:
14540603
NCBI-ProteinID:
XP_003869271
UniProt:
H8X542
LinkDB
All DBs
Position
4:533991..535358
Genome browser
AA seq
455 aa
AA seq
DB search
MFGSTSSTTPSFGGFGSGNTNTGGGGLFGAKAGSVGSAPSGGLFGQSNTQQQQPQQQQQN
TSSGLFGGKPTGSTGSGLFGQSNTTGASGGLFGQSNQQQSQQQASQPSGLFGNAQNQQQQ
QQPSTGGGLFGQSNQQQPSTGGGLFGQQNQQQSSTGGGLFGGSSNTNAGGSLFGKPSTTS
GGLFGANSSSQPSGGIVGGGTNTNQPSGGLFGNSNTNTQPSGGLFGSNTNQSSGGLFGSK
PAAGGGLFGQTSQSQSQQQQQQQNSEIQLTAMTRVGDLPPNIKNELQQLDTYINTQHLIA
TTLDSDMTKHDDLINTIPKDITYLQNKLLSTKQALKFDTNQLQDLKNMNNEITEDINNIM
QLIIQLSTPGTKLSSSYQLNEFFIKKIKKYYEVLNIYEETINELESVLNGLERNCNEGFG
SLASIVQVIKSQYALFMDLCETMAQLHNEINRQSK
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atgtttggactgacctcatcaacaactccatcgtttgggggatttggatctgggaatact
aatacaggtggaggtggcttattcggcgcaaaggcaggatccgtaggctcagcgccaagt
ggaggtctattcggtcaatcaaatacacagcagcaacaaccgcaacagcaacagcaaaat
acatcgagtggattgttcggaggcaaacccacaggaagcacaggcagtggattgtttggc
cagagcaatacaacgggtgctagtggtggattatttggacagtcaaaccaacaacaatca
caacaacaggcatcacagcctagtggtctattcggtaatgcccagaatcaacaacagcaa
cagcaaccttcaaccggtggtggtctcttcggtcaactgaaccagcagcaaccttctact
ggtggaggtcttttcggtcaacagaatcaacaacaatcgtctactggaggcgggttattt
ggaggatcgctgaacactaacgcagggggtagtttattcggtaaaccaagcactacttcg
ggtggtttatttggtgccaactcttcttcacagccaagtgggggtattgtcggcggtgga
accaataccaatcaaccaagtggaggattatttggtaacagtaacaccaatacacagcct
agtggaggtctctttggctctaatactaatcagtctagtggcggattatttggaagcaaa
ccagcagccggaggaggactttttggacaaacgtctcagtctcagtctcagcagcagcag
caacaacaaaattcagaaatccagttaaccgccatgaccagagttggcgatctcccgcca
aacatcaagaatgaactacaacaacttgacacatatataaacactcaacatctaattgca
actaccttagactcagatatgaccaaacacgatgacttgatcaataccattccaaaagat
ataacgtacttgcaaaataaattactatctacaaagcaagcgcttaaatttgacactaat
cagttgcaagatcttaaaaatatgaataacgaaatcaccgaagacataaacaacatcatg
caactaattattcaattgagcacaccagggacaaaattatccagttcgtatcagttaaat
gaattcttcattaagaagattaaaaagtattacgaagtactcaatatatatgaggagacc
atcaatgaattagagagtgtgctaaatggattagagaggaattgtaatgaagggtttgga
agtttggctagtattgttcaagtcattaaatctcaatatgctttattcatggacctatgt
gagactatggcacaattacataatgagataaataggcaaagcaagtag
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