KEGG   Candida orthopsilosis: CORT_0D04640
Entry
CORT_0D04640      CDS       T02488                                 
Name
(RefSeq) Ret1 protein
  KO
K03021  DNA-directed RNA polymerase III subunit RPC2 [EC:2.7.7.6]
Organism
cot  Candida orthopsilosis
Pathway
cot03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:cot00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    CORT_0D04640
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cot03021]
    CORT_0D04640
Enzymes [BR:cot01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     CORT_0D04640
Transcription machinery [BR:cot03021]
 Eukaryotic type
  RNA polymerase III system
   RNA polymerase III
    Core subunits
     CORT_0D04640
SSDB
Motif
Pfam: RNA_pol_Rpb2_6 RNA_pol_Rpb2_1 RNA_pol_Rpb2_2 RNA_pol_Rpb2_7 RNA_pol_Rpb2_4 RNA_pol_Rpb2_3 RNA_pol_Rpb2_5 DUF7484
Other DBs
NCBI-GeneID: 14540404
NCBI-ProteinID: XP_003869439
UniProt: H8X656
LinkDB
Position
4:910377..913826
AA seq 1149 aa
MARKAKSIADDAFNELFQPEYKGKRLTDEINTAEDKWNLLPAFLKIKGLVKQHLDSFNYF
VDVDLKKILNANSLVLSDVDPDFYVKYIDIRVGHKSTSPPGTKEVILPPHECRLRDLTYS
APIYVDVEYTRGRKIIRHYDLEIGRMPIMLRSNKCMLDGMDDKMMAQVDECPLDPGGYFI
VNGTEKVILVQEQLSKNRIIVEADEKKGIVQASVTSSTHERKSKTYVITKNDKIYLKHNS
ISEDIPIVIVLKAAGVTSDLEILQLVCGSDPNYQDLFVVNFEEAAKLEVFTQQQALLYLG
KRVKTIRRAGAPKLSQLQEGIEAIATTIIAHLTVVDLQFREKALYMAMMARRVVMAMHNP
KMVDDRDYVGNKRLELAGQLMSLLFEDLFKKFNSDFKANIDKILKKPSRTSEFDALLSIN
IHSNNITMGLNRAISTGNWSLKRFKMERAGVTHVLSRLSYISALGMMTRISSQFEKSRKV
SGPRALQPSQFGMLCTADTPEGEACGLVKNLALMTHITTDDEEGPIKKLCTALGCESILG
LDSATLHVEGNFGVYLNGTLLGATRFPVKFVTDFRRLRRAGKVSAFVSIYTNTHQQAVHI
ATDGGRICRPLIIVENNKSKVEANHLAKLLNGEWEFDDFLKEGLVEYLDVNEENDSLIAL
YEKDIGENPNATVTHLEIEPFTVLGAVAGLIPYPHHNQSPRNTYQCAMGKQAIGAIAYNQ
FRRIDTLLYFMVYPQQPMVKTKTIELINYDKLPAGQNATVAVMSYSGYDIEDALVLNKSS
LDRGFGRCQVVRKNTVQLKKYPNHSKDILSGMRVDENDEPIFPHQALGPDGLGEVGSKIE
NGQVFANKCVPTNSGDSSLGQPQQVESHREAPLFYKGPEPSYVDQVMMSVSDNDQALIKV
LLRQTRRPELGDKFSSRHGQKGVCGIIVQQEDLPFNDDGISPDIIMNPHGFPSRMTVGKM
IELISGKAGVLNGSLEYGTCFGGSKLEEMSKILVEKGFSYSGKDMLYSGITGECLQAYIF
FGPIYYQKLKHMVLDKMHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCVIAYGASQL
LLERLMISSDAFEVDVCNKCGLMGYNSWCTTCKSSENIIKMTIPYAAKLLFQELLSMNIA
PRLRLGDVF
NT seq 3450 nt   +upstreamnt  +downstreamnt
atggcgagaaaggcaaagagtatcgcggacgatgcttttaacgagctttttcaacctgaa
tacaagggaaaacgtttaaccgacgaaatcaacactgcagaagataagtggaatttgttg
ccagcatttttgaaaatcaagggtttagtcaaacaacatttagactcttttaattacttt
gttgatgtggatttgaaaaagattttgaatgcaaactcgctcgtcttgtcagatgttgat
cctgacttttacgtcaagtatatagacataagagttggtcataaatctacgtcgccacca
ggaacaaaggaagtgatactaccacctcacgaatgtaggttaagagatttgacctatagt
gctccaatatatgttgatgttgaatacacaagaggtcgaaaaattataagacactatgac
ttggaaatcggaagaatgccgatcatgctaagatccaataaatgtatgttggacggaatg
gatgataaaatgatggcccaggttgatgagtgtcctttagatccaggggggtatttcata
gtgaatggtacggaaaaagtcatcttggtgcaggaacaattatcaaagaatagaatcatt
gttgaagcagatgagaaaaaggggatagttcaagcttctgtcacatcctctacacatgaa
cgtaaatcgaaaacctatgtgatcaccaaaaacgacaaaatttatctcaaacacaactcc
attagcgaggatattcctattgtgatagtattaaaagcagcaggtgttacgtcggatttg
gaaattctacaacttgtttgtggttctgatcctaattatcaggaccttttcgtggtaaac
tttgaagaggctgcaaaattagaagtgtttactcaacagcaagctttactttatttggga
aaaagggtaaagacaatcaggagagccggcgctcctaaattatcccaattgcaagaaggt
atagaggccatcgcaaccactataattgcccacttgacagttgttgatttgcaattcagg
gaaaaagcattatacatggcaatgatggcaaggcgtgtagttatggccatgcataatcca
aaaatggtggatgatcgtgattacgttggtaacaaaagattggaactcgcaggtcaacta
atgtccttgctttttgaagatttattcaaaaagttcaactccgacttcaaagctaatatc
gacaaaattttaaagaaacctagccgtacgtctgaatttgatgcattattgtcaatcaac
attcactccaacaacattactatgggactaaacagagcaatatcgacaggtaactggtct
ttgaaacgtttcaagatggaaagggctggtgttactcatgttctttcgagattgtcgtat
atttccgctttgggaatgatgacgcgtatctcatcacaattcgaaaagtcaagaaaagtg
tcaggccctcgtgctttacaaccttctcagtttggaatgctttgtacagctgatacacca
gaaggtgaggcttgtggtttggtcaagaatctagcgttgatgacccatattacgacagac
gatgaagagggccctatcaaaaagttgtgtactgcactcggttgtgaatctattttaggt
ttggactcggcgactttgcacgtagaaggaaactttggagtctacctcaatggtactttg
ctaggtgctactagatttccagtgaaatttgtcactgacttccgtcgattgagaagggca
ggtaaagtctctgcatttgtaagcatttacactaatacacatcaacaagctgtgcatatt
gcaactgatggtggaagaatttgtcgtccgttgatcatcgtggagaataataaatccaag
gttgaagcaaaccatttggccaaattgttgaatggtgagtgggagtttgacgactttttg
aaagagggattagtcgagtacctcgatgtgaatgaggaaaacgattcattgattgcatta
tacgaaaaggacattggcgaaaaccccaatgctacagttactcatttggaaattgaaccc
tttaccgtactaggggccgttgctggtttaattccttacccacaccacaatcaatctcct
agaaatacatatcaatgtgcgatgggtaaacaagctataggtgccattgcttataaccaa
ttcaggaggattgatactttactttactttatggtttacccacaacaacctatggtgaag
acaaagacaattgaactcatcaattatgataaattaccagctggtcagaatgctactgtg
gcggttatgtcctattcaggttacgatattgaagatgctttggtgctcaacaaatcatct
ttagatagagggtttggaagatgtcaagttgttcgaaaaaatactgttcaattgaaaaag
tatccaaatcacagtaaagatatattgtcggggatgagagtggatgaaaatgatgaacct
atttttccacaccaagctttgggtccagatggtttgggtgaagttggaagtaaaattgaa
aatgggcaagtttttgccaacaaatgtgttccaaccaactctggtgattcgagtttggga
cagcctcaacaagtggaaagccatcgagaagcaccattgttttacaaaggacccgagcca
tcttatgttgatcaagttatgatgtctgtcagtgacaacgatcaggcgttgatcaaagtg
ttgctccgacagaccagaagaccagaattgggagataagttttcttcaagacatgggcag
aagggtgtctgtggaatcattgtccagcaagaggacttgccattcaatgacgacggtata
tctcctgatattattatgaatccacatggtttcccatctcgtatgacggttggtaaaatg
attgaattgatatcaggaaaagcaggtgttttgaatgggtctttggaatatggtacttgt
tttggtgggtcaaaattggaagagatgtcaaagattcttgttgaaaagggattctcatat
tccggtaaagacatgttgtattcaggaatcacaggagagtgtttgcaagcatacattttc
tttggtccaatctattatcaaaagttgaagcatatggtgttggacaagatgcatgcgaga
gcaagaggtccaagggcagtattgactagacagccaacagaaggtagatctagagacggt
ggtttgagattgggagaaatggaaagagattgtgttattgcgtatggtgcttctcaatta
cttttggaaagattaatgatatcttcagatgcctttgaagtggatgtctgtaacaagtgt
ggattgatgggatacaattcatggtgtaccacatgcaaaagttctgaaaatatcataaag
atgacaattccgtacgcggcaaaattactattccaagaattgctttccatgaatatagct
ccaagattgaggttgggtgatgttttttaa

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