Candida orthopsilosis: CORT_0D04640
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Entry
CORT_0D04640 CDS
T02488
Name
(RefSeq) Ret1 protein
KO
K03021
DNA-directed RNA polymerase III subunit RPC2 [EC:
2.7.7.6
]
Organism
cot
Candida orthopsilosis
Pathway
cot03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cot00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CORT_0D04640
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cot03021
]
CORT_0D04640
Enzymes [BR:
cot01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CORT_0D04640
Transcription machinery [BR:
cot03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
CORT_0D04640
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
DUF7484
Motif
Other DBs
NCBI-GeneID:
14540404
NCBI-ProteinID:
XP_003869439
UniProt:
H8X656
LinkDB
All DBs
Position
4:910377..913826
Genome browser
AA seq
1149 aa
AA seq
DB search
MARKAKSIADDAFNELFQPEYKGKRLTDEINTAEDKWNLLPAFLKIKGLVKQHLDSFNYF
VDVDLKKILNANSLVLSDVDPDFYVKYIDIRVGHKSTSPPGTKEVILPPHECRLRDLTYS
APIYVDVEYTRGRKIIRHYDLEIGRMPIMLRSNKCMLDGMDDKMMAQVDECPLDPGGYFI
VNGTEKVILVQEQLSKNRIIVEADEKKGIVQASVTSSTHERKSKTYVITKNDKIYLKHNS
ISEDIPIVIVLKAAGVTSDLEILQLVCGSDPNYQDLFVVNFEEAAKLEVFTQQQALLYLG
KRVKTIRRAGAPKLSQLQEGIEAIATTIIAHLTVVDLQFREKALYMAMMARRVVMAMHNP
KMVDDRDYVGNKRLELAGQLMSLLFEDLFKKFNSDFKANIDKILKKPSRTSEFDALLSIN
IHSNNITMGLNRAISTGNWSLKRFKMERAGVTHVLSRLSYISALGMMTRISSQFEKSRKV
SGPRALQPSQFGMLCTADTPEGEACGLVKNLALMTHITTDDEEGPIKKLCTALGCESILG
LDSATLHVEGNFGVYLNGTLLGATRFPVKFVTDFRRLRRAGKVSAFVSIYTNTHQQAVHI
ATDGGRICRPLIIVENNKSKVEANHLAKLLNGEWEFDDFLKEGLVEYLDVNEENDSLIAL
YEKDIGENPNATVTHLEIEPFTVLGAVAGLIPYPHHNQSPRNTYQCAMGKQAIGAIAYNQ
FRRIDTLLYFMVYPQQPMVKTKTIELINYDKLPAGQNATVAVMSYSGYDIEDALVLNKSS
LDRGFGRCQVVRKNTVQLKKYPNHSKDILSGMRVDENDEPIFPHQALGPDGLGEVGSKIE
NGQVFANKCVPTNSGDSSLGQPQQVESHREAPLFYKGPEPSYVDQVMMSVSDNDQALIKV
LLRQTRRPELGDKFSSRHGQKGVCGIIVQQEDLPFNDDGISPDIIMNPHGFPSRMTVGKM
IELISGKAGVLNGSLEYGTCFGGSKLEEMSKILVEKGFSYSGKDMLYSGITGECLQAYIF
FGPIYYQKLKHMVLDKMHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCVIAYGASQL
LLERLMISSDAFEVDVCNKCGLMGYNSWCTTCKSSENIIKMTIPYAAKLLFQELLSMNIA
PRLRLGDVF
NT seq
3450 nt
NT seq
+upstream
nt +downstream
nt
atggcgagaaaggcaaagagtatcgcggacgatgcttttaacgagctttttcaacctgaa
tacaagggaaaacgtttaaccgacgaaatcaacactgcagaagataagtggaatttgttg
ccagcatttttgaaaatcaagggtttagtcaaacaacatttagactcttttaattacttt
gttgatgtggatttgaaaaagattttgaatgcaaactcgctcgtcttgtcagatgttgat
cctgacttttacgtcaagtatatagacataagagttggtcataaatctacgtcgccacca
ggaacaaaggaagtgatactaccacctcacgaatgtaggttaagagatttgacctatagt
gctccaatatatgttgatgttgaatacacaagaggtcgaaaaattataagacactatgac
ttggaaatcggaagaatgccgatcatgctaagatccaataaatgtatgttggacggaatg
gatgataaaatgatggcccaggttgatgagtgtcctttagatccaggggggtatttcata
gtgaatggtacggaaaaagtcatcttggtgcaggaacaattatcaaagaatagaatcatt
gttgaagcagatgagaaaaaggggatagttcaagcttctgtcacatcctctacacatgaa
cgtaaatcgaaaacctatgtgatcaccaaaaacgacaaaatttatctcaaacacaactcc
attagcgaggatattcctattgtgatagtattaaaagcagcaggtgttacgtcggatttg
gaaattctacaacttgtttgtggttctgatcctaattatcaggaccttttcgtggtaaac
tttgaagaggctgcaaaattagaagtgtttactcaacagcaagctttactttatttggga
aaaagggtaaagacaatcaggagagccggcgctcctaaattatcccaattgcaagaaggt
atagaggccatcgcaaccactataattgcccacttgacagttgttgatttgcaattcagg
gaaaaagcattatacatggcaatgatggcaaggcgtgtagttatggccatgcataatcca
aaaatggtggatgatcgtgattacgttggtaacaaaagattggaactcgcaggtcaacta
atgtccttgctttttgaagatttattcaaaaagttcaactccgacttcaaagctaatatc
gacaaaattttaaagaaacctagccgtacgtctgaatttgatgcattattgtcaatcaac
attcactccaacaacattactatgggactaaacagagcaatatcgacaggtaactggtct
ttgaaacgtttcaagatggaaagggctggtgttactcatgttctttcgagattgtcgtat
atttccgctttgggaatgatgacgcgtatctcatcacaattcgaaaagtcaagaaaagtg
tcaggccctcgtgctttacaaccttctcagtttggaatgctttgtacagctgatacacca
gaaggtgaggcttgtggtttggtcaagaatctagcgttgatgacccatattacgacagac
gatgaagagggccctatcaaaaagttgtgtactgcactcggttgtgaatctattttaggt
ttggactcggcgactttgcacgtagaaggaaactttggagtctacctcaatggtactttg
ctaggtgctactagatttccagtgaaatttgtcactgacttccgtcgattgagaagggca
ggtaaagtctctgcatttgtaagcatttacactaatacacatcaacaagctgtgcatatt
gcaactgatggtggaagaatttgtcgtccgttgatcatcgtggagaataataaatccaag
gttgaagcaaaccatttggccaaattgttgaatggtgagtgggagtttgacgactttttg
aaagagggattagtcgagtacctcgatgtgaatgaggaaaacgattcattgattgcatta
tacgaaaaggacattggcgaaaaccccaatgctacagttactcatttggaaattgaaccc
tttaccgtactaggggccgttgctggtttaattccttacccacaccacaatcaatctcct
agaaatacatatcaatgtgcgatgggtaaacaagctataggtgccattgcttataaccaa
ttcaggaggattgatactttactttactttatggtttacccacaacaacctatggtgaag
acaaagacaattgaactcatcaattatgataaattaccagctggtcagaatgctactgtg
gcggttatgtcctattcaggttacgatattgaagatgctttggtgctcaacaaatcatct
ttagatagagggtttggaagatgtcaagttgttcgaaaaaatactgttcaattgaaaaag
tatccaaatcacagtaaagatatattgtcggggatgagagtggatgaaaatgatgaacct
atttttccacaccaagctttgggtccagatggtttgggtgaagttggaagtaaaattgaa
aatgggcaagtttttgccaacaaatgtgttccaaccaactctggtgattcgagtttggga
cagcctcaacaagtggaaagccatcgagaagcaccattgttttacaaaggacccgagcca
tcttatgttgatcaagttatgatgtctgtcagtgacaacgatcaggcgttgatcaaagtg
ttgctccgacagaccagaagaccagaattgggagataagttttcttcaagacatgggcag
aagggtgtctgtggaatcattgtccagcaagaggacttgccattcaatgacgacggtata
tctcctgatattattatgaatccacatggtttcccatctcgtatgacggttggtaaaatg
attgaattgatatcaggaaaagcaggtgttttgaatgggtctttggaatatggtacttgt
tttggtgggtcaaaattggaagagatgtcaaagattcttgttgaaaagggattctcatat
tccggtaaagacatgttgtattcaggaatcacaggagagtgtttgcaagcatacattttc
tttggtccaatctattatcaaaagttgaagcatatggtgttggacaagatgcatgcgaga
gcaagaggtccaagggcagtattgactagacagccaacagaaggtagatctagagacggt
ggtttgagattgggagaaatggaaagagattgtgttattgcgtatggtgcttctcaatta
cttttggaaagattaatgatatcttcagatgcctttgaagtggatgtctgtaacaagtgt
ggattgatgggatacaattcatggtgtaccacatgcaaaagttctgaaaatatcataaag
atgacaattccgtacgcggcaaaattactattccaagaattgctttccatgaatatagct
ccaagattgaggttgggtgatgttttttaa
DBGET
integrated database retrieval system