Candida orthopsilosis: CORT_0D04850
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Entry
CORT_0D04850 CDS
T02488
Name
(RefSeq) Lsc2 succinate-CoA ligase beta subunit
KO
K01900
succinyl-CoA synthetase beta subunit [EC:
6.2.1.4
6.2.1.5
]
Organism
cot
Candida orthopsilosis
Pathway
cot00020
Citrate cycle (TCA cycle)
cot00640
Propanoate metabolism
cot01100
Metabolic pathways
cot01110
Biosynthesis of secondary metabolites
cot01200
Carbon metabolism
Module
cot_M00009
Citrate cycle (TCA cycle, Krebs cycle)
cot_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
cot00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
CORT_0D04850
00640 Propanoate metabolism
CORT_0D04850
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cot04147
]
CORT_0D04850
Enzymes [BR:
cot01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.4 succinate---CoA ligase (GDP-forming)
CORT_0D04850
6.2.1.5 succinate---CoA ligase (ADP-forming)
CORT_0D04850
Exosome [BR:
cot04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
CORT_0D04850
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATP-grasp_2
Ligase_CoA
Citrate_synth_N
ATP-grasp_5
GARS_A
Motif
Other DBs
NCBI-GeneID:
14540425
NCBI-ProteinID:
XP_003869460
UniProt:
H8X677
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All DBs
Position
4:join(950446..950478,950802..952016)
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AA seq
415 aa
AA seq
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MLSRSIARFSRSIAQQKRFLSLHEYRSAALLSEYGVPIPRGYPATTAEGAFDAAKKLGTD
ELVIKAQALTGGRGKGHFDSGLQGGVKLISSPDEAKDLASQMLGHKLITKQTGAKGKEVT
AVYIVERRDAQSEAYVAILMDRAKQTPVIVASAQGGMDIEGVAAKDPSAIKTFPVPLEEG
VSDKLATEIASSLGFTKDAVPEAAKTIQGLYKCFIDRDCTQVEINPLSETPDHKVLAMDA
KLGFDDNAAFRQEEVFSWRDPTQEDPQEAEASKYGLNFIKLDGNIANIVNGAGLAMATMD
IIKLYGGEPANFLDCGGTATPETIEKAFELILSDKNVNGIFVNIFGGIVRCDYVAKGLIA
ATKNFNLEIPVVVRLQGTNMAEAKELIENSGLKLYAFEDLDPAAEKIVELAPKRS
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgttgtcaagatccattgctcgtttttcaaggtcgattgcccaacaaaaaagattcttg
tctttacatgaataccgttctgctgctttattgagcgagtatggtgttccaattccaaga
ggttacccagcaactactgctgaaggtgccttcgatgctgctaaaaagttgggcaccgat
gaattggttatcaaggcacaagcattgactggtggtcgtggtaaaggtcactttgactct
ggtttacaaggtggtgttaaattgatttcatcaccagatgaagctaaagatttagctagt
caaatgttgggtcacaaattgatcactaagcaaaccggtgccaaaggtaaggaagttact
gctgtctacattgttgaaagaagagacgctcaatctgaagcttatgttgctattttgatg
gacagagctaagcaaactccagttattgttgcttctgctcaaggtggtatggacattgaa
ggtgttgctgctaaagatccatctgccattaaaaccttcccagttccattggaagaaggt
gtttcagacaaattggctactgaaattgcatcctcattgggattcaccaaggatgctgtt
ccagaagccgccaagactatccaaggattgtacaaatgtttcattgaccgtgactgtact
caagtcgaaatcaacccattgtcagaaaccccagaccacaaagttttggccatggatgcc
aagttaggttttgatgacaatgccgctttccgtcaagaagaagttttctcatggagagac
ccaactcaagaagatccacaagaggctgaagccagtaaatatggtttgaactttataaag
ttggatggtaacattgccaacattgtcaacggtgctggtttggctatggccactatggat
atcatcaaattatatggtggtgaaccagctaacttcttggactgtggtggtactgctacc
ccagaaaccattgaaaaggcttttgaattgatcttgtccgacaaaaacgttaacggtatt
tttgtaaatatctttggtggtattgttagatgtgattacgttgccaaaggtttgattgct
gcaaccaagaacttcaacttggaaatcccagttgtcgttagattgcaaggtaccaacatg
gctgaagctaaggaattgattgaaaactctggtttgaaattatacgcctttgaggatttg
gatccagctgccgaaaagattgtagaattggctccaaagagatcataa
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