Candida orthopsilosis: CORT_0D05890
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Entry
CORT_0D05890 CDS
T02488
Name
(RefSeq) Afg2 protein
KO
K14575
AAA family ATPase
Organism
cot
Candida orthopsilosis
Pathway
cot03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
cot00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
CORT_0D05890
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cot03009
]
CORT_0D05890
Ribosome biogenesis [BR:
cot03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
CORT_0D05890
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
RuvB_N
AAA_16
AAA_5
AAA_22
AAA_14
AAA_2
TIP49
CDC48_N
Rad17
Bac_DnaA
RNA_helicase
AAA_28
Mg_chelatase
AAA_33
AAA_7
nSTAND3
AAA_24
ABC_tran
ATPase_2
AAA_11
DUF815
AAA_18
AAA_19
AAA_30
Motif
Other DBs
NCBI-GeneID:
14540473
NCBI-ProteinID:
XP_003869562
UniProt:
H8X5H1
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All DBs
Position
4:1183165..1185435
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AA seq
756 aa
AA seq
DB search
MSSKSSSKKKSASTPDPAPQATAKKIKIPKSFIVRPHSSSAKPKTITNVYLSPEIFEALE
LKLKDFVYISQVNGQPGIIAVAISSDDIPMRNIITISKSLRHLGGLLLGDRVNISKYNGQ
PPYASTVTVHGDKDPKSVLEDIGLIYPGLKVENGDSGFTIVEIHGGIDSKMKQLSLSDEE
MSLRTISPAFIYTSQATIESTDETEPSITKYPLLPRPPSFSQVGGLAKQTGLLKSTIQLP
LHNPTLFSDFGISPPRGILLYGPPGTGKTMLLRCAANETNAHILTINGPSIVSKYLGETE
NAIREIFEEAAQFQPSIIFMDEIDSLVPSRNSDDSGETESRVVATLLTMMDGMDNSGRIV
VVGATNRPNAIDIALRRPGRFDQEIEIGIPDVEARQDILQKQFDKMNKNKYELSAEDIAL
VATKTHGYVGADLTALCREAVMKAINRGLASGTPQEKIKVTLDDLLEALGEIRPSAMREI
FLEMPKVYWSDIGGQEELKKKLVEVVQLPLEASASFAKLGVNAPKGVLLYGPPGCSKTLT
AKALATESGLNFLAIKGPEVFNKYVGESERTIREIFRKARAAAPSIIFLDEIDALASDRD
GDSGGTSASKNVLTSLLNEIDGVEELKGVVIIGATNKPTEIDSALLRPGRLDRHIYVAPP
DYDARLQILTKCCRKFDLVEVDLTKYAKLTDGCSGAEVTLLCQEAGLNAIMEDRDAQRVE
TRHFEHALQGISHGITDDMLQYYKDFANRTGLNIGN
NT seq
2271 nt
NT seq
+upstream
nt +downstream
nt
atgtcttccaaatcatcatccaaaaagaaactggcttcgacacctgatcctgcgcctcaa
gcaacagcaaagaaaataaaaattcccaagtcattcatagttaggccacactcatcatct
gccaaacccaaaaccatcaccaatgtatacttaagcccggaaatttttgaagcgttggag
ttgaaattgaaagatttcgtttatatcagtcaagtcaatggccagcctggtataatagcc
gttgctatactgtctgatgatataccgatgagaaatataatcactatatccaaaagctta
aggcaccttggtgggctactcttaggggacagagtcaacatatctaagtacaatggccaa
cctccgtatgcgctgactgtgactgttcatggagataaggatccaaaatccgtgttggaa
gatatagggctaatctaccctggattaaaagttgagaatggagacagtggatttacaatc
gttgagatacacggtggtatagattcaaaaatgaagcaattgtcactttcggatgaagaa
atgtctttgcgtactatttcacccgctttcatctacacatcgcaagctacgatagagagt
actgatgaaaccgagccctcaatcacgaaatatccccttctaccacgtcctccatcgttt
tcccaggtaggtggacttgcaaaacaaacaggtctactcaagtcaactattcaacttcct
ttgcataatcctaccttgttttctgattttggaatatcaccacccagaggcatcttgctt
tatggcccaccaggaacaggaaagacaatgctccttcgatgcgcagccaatgaaaccaac
gcgcatatcttaaccattaatggtccatccattgtgtccaaatatttgggagaaactgaa
aatgcaattcgagaaatattcgaagaggcagcacaattccaaccctccatcatctttatg
gatgaaattgactcacttgttccatcacgtaattcagatgattcaggagaaacagagagc
cgtgtagttgcgaccttgttaacaatgatggatggaatggataatagtggcagaatagtt
gtcgttggggccactaatcggccaaatgcgatagatattgcgttacgcagacctggtaga
tttgatcaagagattgaaattggtattcctgatgttgaagcaaggcaagatattttacaa
aagcaatttgataaaatgaacaagaacaaatacgaattgagcgcggaggatatagctttg
gtggcgacaaagactcatggatacgttggtgctgacttgactgcattgtgtagagaggca
gtgatgaaagctattaatagaggcttggctagtggcacaccacaggagaagatcaaagta
actctagatgacttgcttgaagctttgggtgaaataagaccatcggctatgagggagatt
tttttagaaatgccgaaagtatattggtccgatattggtggacaggaggagctaaagaag
aaacttgttgaagttgttcaattgcctttggaagcgtcggcttcctttgcaaaattagga
gtcaatgctccaaagggtgttctattatatgggccaccaggttgttccaaaacacttact
gcaaaagcacttgcaactgaatccggtctcaactttttagcaatcaagggaccagaggtt
ttcaacaaatatgttggtgagagtgagcgaacgattcgtgaaattttcagaaaagcccga
gctgcagctccatcaatcatatttttggatgaaattgatgctcttgccagtgatcgtgat
ggtgatagtggaggtacaagtgcttcaaaaaatgtcttgacctcattgttgaatgagatt
gatggagtggaagagttgaagggagtcgttatcattggtgccactaataaaccaacagag
atagattcagctttgcttagacctggtcggttagatcgtcatatatatgttgctccacct
gattatgacgcaagattgcagatcttaaccaaatgctgtcgcaagtttgatttggttgaa
gtggatttgacaaaatatgcaaaacttactgacggttgttcgggtgctgaagtcacatta
ttgtgtcaagaagctggtttaaatgctatcatggaagatcgtgacgcacagcgtgttgaa
actagacatttcgaacatgctttacaaggaatatctcatggtattactgatgacatgtta
caatattacaaggattttgctaatagaacgggactaaatattggaaattaa
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