Candida orthopsilosis: CORT_0D06400
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Entry
CORT_0D06400 CDS
T02488
Name
(RefSeq) hypothetical protein
KO
K14328
regulator of nonsense transcripts 3
Organism
cot
Candida orthopsilosis
Pathway
cot03013
Nucleocytoplasmic transport
cot03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cot00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
CORT_0D06400
03015 mRNA surveillance pathway
CORT_0D06400
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cot03019
]
CORT_0D06400
Messenger RNA biogenesis [BR:
cot03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
CORT_0D06400
mRNA cycle factors
P-body specific factors
CORT_0D06400
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Smg4_UPF3
Motif
Other DBs
NCBI-GeneID:
14540522
NCBI-ProteinID:
XP_003869609
UniProt:
H8X5L8
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All DBs
Position
4:1311898..1313079
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AA seq
393 aa
AA seq
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MTSIAPTRHPEAAIPTTTATKRHNTTKHRSESVITPAPTANTSTSKRASKGGLEQYVKLS
IRLLPPGLKEDEFLNQMANIYPHHASKIHLHYFVQGSYPSTPFELPIYSRAYVSFRNVPD
SSEFHSFVKNKPFQDEKDSIIPIVEKSVFQKMTTSENFSILKRESQVDKNSSRLEDDEIY
KKFLLYLDKGLDDFDLKRIHKSLNKRHKEEISKDQSVPLSKGSQHKKDTKSKNSAKGKEK
DKQKKPKAKTKQNAKKKEKEKEKEKEKEKEKEDGQDADKGLEKGKENENKKRKKKRKRRA
QEQGTTGEATAGKDASKDEKVPTTAKAPENKKDVSGGSKSRSRQRNRKRGGERKESGITK
HEDEPASSLKELKPIKILSKKSKQETSEANVKN
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
atgacgtcgatagcaccaacaagacacccagaagctgctataccaacaactacggcaaca
aagcgtcataacacaacaaaacatagatctgagagtgtcatcacccctgctccaacagct
aataccagtaccagtaaaagggcttcaaaaggcggattggaacagtatgtcaaattatca
attaggttactacctccgggcctcaaggaagacgaatttctaaatcaaatggcaaatatt
tatcctcatcatgcctcgaaaatacatcttcactactttgttcagggttcatatccactg
actccgtttgagcttcctatttatagcagggcgtatgtcagcttcagaaatgtccccgat
tcatccgaatttcattcctttgtgaaaaacaaaccttttcaggatgagaaggattctatt
attccaattgtggaaaagtcagttttccaaaagatgacaacgtctgaaaattttagtata
ttgaaaagggagtcacaagtcgataagaattccagtcgtttggaagatgacgaaatttat
aaaaagtttctcctatatttagataaaggattggatgactttgatctaaaaaggattcat
aaatcattgaacaagaggcacaaagaggaaattagtaaggaccaatcagtaccgctctcg
aaaggtagccagcataaaaaggacaccaagagtaagaattcagctaaaggaaaggaaaag
gacaagcaaaagaaaccaaaagcgaagacaaaacagaacgcaaagaagaaggagaaggag
aaggagaaggagaaggagaaggagaaggagaaagaagatggacaagacgccgataaaggt
ttagaaaagggaaaggaaaatgagaataaaaagaggaagaagaagagaaaaagacgggct
caagagcagggaactactggtgaggcgacagccggtaaagatgcgagcaaagacgagaag
gtgcctaccactgctaaagcccccgaaaacaagaaagacgtatcaggtggttccaagtct
cgcctgagacaacgcaatcgaaagagaggaggagaacggaaagaaagtggcatcacaaag
catgaggatgaaccagcatctagtttgaaggaactcaaaccaataaagatattaagtaaa
aaatccaagcaggaaactagtgaagctaacgtcaaaaactag
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