KEGG   Candida orthopsilosis: CORT_0D06400
Entry
CORT_0D06400      CDS       T02488                                 
Name
(RefSeq) hypothetical protein
  KO
K14328  regulator of nonsense transcripts 3
Organism
cot  Candida orthopsilosis
Pathway
cot03013  Nucleocytoplasmic transport
cot03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:cot00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    CORT_0D06400
   03015 mRNA surveillance pathway
    CORT_0D06400
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cot03019]
    CORT_0D06400
Messenger RNA biogenesis [BR:cot03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Surveillance factors
    Surveillance complex
     CORT_0D06400
   mRNA cycle factors
    P-body specific factors
     CORT_0D06400
SSDB
Motif
Pfam: Smg4_UPF3
Other DBs
NCBI-GeneID: 14540522
NCBI-ProteinID: XP_003869609
UniProt: H8X5L8
LinkDB
Position
4:1311898..1313079
AA seq 393 aa
MTSIAPTRHPEAAIPTTTATKRHNTTKHRSESVITPAPTANTSTSKRASKGGLEQYVKLS
IRLLPPGLKEDEFLNQMANIYPHHASKIHLHYFVQGSYPSTPFELPIYSRAYVSFRNVPD
SSEFHSFVKNKPFQDEKDSIIPIVEKSVFQKMTTSENFSILKRESQVDKNSSRLEDDEIY
KKFLLYLDKGLDDFDLKRIHKSLNKRHKEEISKDQSVPLSKGSQHKKDTKSKNSAKGKEK
DKQKKPKAKTKQNAKKKEKEKEKEKEKEKEKEDGQDADKGLEKGKENENKKRKKKRKRRA
QEQGTTGEATAGKDASKDEKVPTTAKAPENKKDVSGGSKSRSRQRNRKRGGERKESGITK
HEDEPASSLKELKPIKILSKKSKQETSEANVKN
NT seq 1182 nt   +upstreamnt  +downstreamnt
atgacgtcgatagcaccaacaagacacccagaagctgctataccaacaactacggcaaca
aagcgtcataacacaacaaaacatagatctgagagtgtcatcacccctgctccaacagct
aataccagtaccagtaaaagggcttcaaaaggcggattggaacagtatgtcaaattatca
attaggttactacctccgggcctcaaggaagacgaatttctaaatcaaatggcaaatatt
tatcctcatcatgcctcgaaaatacatcttcactactttgttcagggttcatatccactg
actccgtttgagcttcctatttatagcagggcgtatgtcagcttcagaaatgtccccgat
tcatccgaatttcattcctttgtgaaaaacaaaccttttcaggatgagaaggattctatt
attccaattgtggaaaagtcagttttccaaaagatgacaacgtctgaaaattttagtata
ttgaaaagggagtcacaagtcgataagaattccagtcgtttggaagatgacgaaatttat
aaaaagtttctcctatatttagataaaggattggatgactttgatctaaaaaggattcat
aaatcattgaacaagaggcacaaagaggaaattagtaaggaccaatcagtaccgctctcg
aaaggtagccagcataaaaaggacaccaagagtaagaattcagctaaaggaaaggaaaag
gacaagcaaaagaaaccaaaagcgaagacaaaacagaacgcaaagaagaaggagaaggag
aaggagaaggagaaggagaaggagaaggagaaagaagatggacaagacgccgataaaggt
ttagaaaagggaaaggaaaatgagaataaaaagaggaagaagaagagaaaaagacgggct
caagagcagggaactactggtgaggcgacagccggtaaagatgcgagcaaagacgagaag
gtgcctaccactgctaaagcccccgaaaacaagaaagacgtatcaggtggttccaagtct
cgcctgagacaacgcaatcgaaagagaggaggagaacggaaagaaagtggcatcacaaag
catgaggatgaaccagcatctagtttgaaggaactcaaaccaataaagatattaagtaaa
aaatccaagcaggaaactagtgaagctaacgtcaaaaactag

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