Lodderomyces orthopsilosis: CORT_0D06550
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Entry
CORT_0D06550 CDS
T02488
Name
(RefSeq) Trz1 protein
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
cot
Lodderomyces orthopsilosis
Brite
KEGG Orthology (KO) [BR:
cot00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cot03016
]
CORT_0D06550
Enzymes [BR:
cot01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
CORT_0D06550
Transfer RNA biogenesis [BR:
cot03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
CORT_0D06550
Prokaryotic type
CORT_0D06550
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Lactamase_B_4
Lactamase_B_2
Anti-Pycsar_Apyc1
Cep192_D5
Motif
Other DBs
NCBI-GeneID:
14540630
NCBI-ProteinID:
XP_003869622
UniProt:
H8X5N1
LinkDB
All DBs
Position
4:1355285..1357801
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AA seq
838 aa
AA seq
DB search
MFKFTTIAHINNDTTRPLVALTTRQGNRYLFGKIPEGTQRVINSVGSEVRFPKLQSIFLT
GAIFTWSDIGGLPGLFLTISDATKKGIKVVGDCNLLSYIVATWRQFVFRLGIDLEIDNVD
QNPVVSNDEIVVRSLKIAPKSLITTKGPAVSTSEKVLTQIRKLASLMFPLNTSEVNSRNP
ESYKSDPSSKDIHTHVQLPPASKLITQQDSISYCIEFVPIPGKFDAKKAKDLGLKPGPVF
KELVAGNSVVNDAGETILPSQVVGPDRIMPKVLIIDIPSQDYYEPTLTNDQWKSIDNVGL
VYHFIGDDVNLKLQDYQSFIDKFPSNTKHLISHKSLTNNIIINEKFAMGHLKLMSVMPDN
FQLMNSEPFKPLTENKKVNRLHALQCMGIDDSGVYCDNSNILRSTNESLYKEVTQSDESV
PLFDSLKTRFNLLEKGANLKDLVHISTPGTGSALPSISRNVLSNLIRIPYQHEDGTITYR
SIIMDAGENTIGSMLRNFGHEDKFDLRQIFSELSLIHLSHLHADHHLGMISIINKWFELN
SNCDKTLHLVVPWQFITFVHDWYNLETQYNHAVDLSRLKMFSCEDFLREGRLPEYQKLTI
DEFEQAYDCGDIHCSINKAPLQPINTTVIEEMYDAVGLESISTVRALHCAWAYSSTFKFN
LNANHTQHFTISFSGDTRPNPKFCSIGNKSDLLIHEASLDSFWIDEAIAKKHTAMIEAVG
VCQLMQCPKLLLTHFSSRYGMSNNCIPKLDLSKEAKDLEEQLIEKRVFNIFRNVDVDELE
RLQIVFAYDLMNVRYGDFDKQEEKWPILQNLFEVNSKKRKLATDEEEKGEKVEKITGI
NT seq
2517 nt
NT seq
+upstream
nt +downstream
nt
atgtttaaattcaccactattgcccatataaataatgatacgacacgcccgctagttgca
ttaaccactcgacaaggtaatagatacttgtttggtaaaatccccgagggaacacaacgt
gtaatcaattcagttggatccgaagtacgatttcccaagttacaaagtatatttcttacc
ggtgcaatttttacatggagtgatattggtggactaccgggtctttttctaactattagt
gatgccactaagaaggggattaaagttgttggtgattgtaatttgttgtcgtatattgtt
gctacttggagacaatttgtgtttcgattaggtatagatttggaaattgacaatgttgat
caaaatcccgtggtttccaatgacgagattgttgtcagatcgcttaaaatagcaccaaag
agtttgataacgacaaaggggccagcagtatccacatcggagaaagtgctaacacaaata
cgaaaattggcatcacttatgtttccattgaataccagtgaagtaaacagtcgaaaccca
gaatcatacaagtcagacccttcgctgaaggatatccacactcacgttcaactacctcca
gcttccaagctcataactcaacaagattcaatatcttactgtattgagtttgttccaatt
cctgggaaatttgatgccaaaaaggcaaaagatttgggattaaaaccaggtcctgttttc
aaggaattggtagctggtaattcggtggttaatgatgctggcgagactatcttgcccagt
caagtagttggacctgatcggatcatgcctaaagttttgattattgatatacctagtcag
gactattatgagcccacattaactaatgaccaatggaagagtatcgataatgttggtctt
gtttatcatttcattggcgatgatgtgaatttaaaactacaagattatcagtctttcatt
gataagttcccatcaaatacaaaacatctaattagtcataaatcgttaaccaataacata
atcattaatgagaagtttgccatgggccacttgaaattgatgctggttatgcctgataat
ttccaattaatgaacctggaaccattcaagccattgactgagaataaaaaagtaaatcgt
ttacatgcgctacaatgtatgggtattgatgattcgggtgtttactgtgataacagcaac
attctacgcagtacaaacgaatcattgtataaagaggtgactcaactggatgaatcagta
ccactatttgattcattaaaaactagattcaacttgttagaaaaaggagccaacttgaaa
gatttggtgcatataagtactccaggtactggttctgccctacctagtatttcacgaaat
gtcctttctaatctcatacgaattccttatcaacatgaagatggtaccattacttatcga
tcaatcataatggatgcaggtgaaaataccattgggagcatgttgcgaaatttcggtcat
gaagataaattcgatttgaggcaaatttttagcgagttgagtttgattcatttatctcat
ttacatgctgatcatcatcttggtatgatttcaataatcaataaatggtttgaattgaat
agcaactgcgacaagacattgcatttggtcgtcccttggcagtttatcacttttgttcat
gattggtacaatcttgaaactcaatataaccatgccgtcgatttgtctcgtttaaaaatg
tttagttgtgaggattttcttagggaagggagattaccggaataccagaaactcacaatt
gatgaattcgaacaagcttatgattgtggcgatattcattgcagtatcaataaagcacca
ctacaaccaatcaacactactgtcattgaagaaatgtatgatgccgttggtcttgagtca
atttcaaccgtacgtgcattacattgtgcctgggcatattcatcaactttcaaattcaat
ctcaatgctaatcacacacagcatttcacaatttcattttcgggtgatacgagaccaaat
cccaaattttgttccattggcaataagtccgatctattaatccatgaagcatcattagat
tcattttggatcgatgaagcaattgctaaaaagcatactgccatgattgaagctgttggt
gtttgtcaattgatgcagtgtccaaaattactcttaactcatttcagttcaagatatggc
atgagtaataattgtataccgaaattagacttgagtaaagaagcaaaggatttggaagaa
caattgattgagaaacgagtgtttaatatctttcgaaatgttgatgtggatgaattggag
aggttgcaaattgttttcgcttatgatttgatgaatgttaggtatggggattttgataaa
caagaagagaaatggccgatattgcaaaatttatttgaagttaattccaaaaagaggaaa
ttagccactgacgaagaagaaaagggtgaaaaggttgaaaagattactggaatatag
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