Candida orthopsilosis: CORT_0E00370
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Entry
CORT_0E00370 CDS
T02488
Name
(RefSeq) Hca4 protein
KO
K14776
ATP-dependent RNA helicase DDX10/DBP4 [EC:
5.6.2.7
]
Organism
cot
Candida orthopsilosis
Brite
KEGG Orthology (KO) [BR:
cot00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cot03009
]
CORT_0E00370
Enzymes [BR:
cot01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
CORT_0E00370
Ribosome biogenesis [BR:
cot03009
]
Eukaryotic type
90S particles
Helicases
CORT_0E00370
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
DUF6493
Helicase_C_2
PSP
Motif
Other DBs
NCBI-GeneID:
14541225
NCBI-ProteinID:
XP_003869760
UniProt:
H8X6L6
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All DBs
Position
5:74747..77014
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AA seq
755 aa
AA seq
DB search
MKRHSKSASKSNKREGRKERRQKEEGELKQLKERIENYDPKVDEEAMQQFSDLPITQNTL
RGLKESAFISLTDIQKKTIPIALKGHDLMGTARTGSGKTLAFLIPVIELLIKNDITEYDG
LAALIVSPTRELAVQIFEVLAKIGKYNSFSAGLVTGGKDVQYEKERISRMNILVGTPGRI
SQHLNEAVGMETSNLQVLVLDEADRCLDMGFKKQIDNIISHLPPTRQTLLFSATTTDSVR
DLARLSLTNPKRIGTSSDQDVSAIPESLDQYYVRVPLEEKLDVLWSFIKSHLKSKILVFF
SSSKQVQYTYESFRTLQPGISLLKLYGRNKQTSRLETTMKFAQAQHVCLFATDIVARGLD
FPAIDWVIQVDCPEDVATYVHRVGRSARFGRQGKSLLMLTPTEEEGFLQRLKAQNIEPKL
MNIKQKSKKSIRPQLQSLCFKDPVMKNLGQRAFIAYFKSVHIQKDKEVFNVEALPAEAYA
SSLGLPGAPKIKIKGGSASKEKKNESRKLLALSKSDADGEVEEKPSKVKTKYDRMFERKN
QTILSDHYLNLTNSKANGKEDEEEEDFMTVKRQDHELKDEDLPDLSLPVSKRQAKKALSK
KASIAEKGNPTKLKFDDDGVAHPIYELEGEEDFIKAGDAKKQKEDFLTKEQELMKVTDAA
DKEVERQKRQEKKRKRKEAERRMREEEEHYSESEEDIPDLERDMELDDKKPSTRDTTWFK
DEPEAKRQKKDEFIEIDEPETLEDLESLAAKLISN
NT seq
2268 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgccattcaaaaagtgcctccaagagtaataaacgtgaaggaagaaaagaaaga
cgccaaaaggaagagggggaacttaaacagctcaaagagagaattgaaaactatgatccc
aaagtagacgaagaagcgatgcaacaatttagtgatctaccaatcacacagaatactcta
agaggactcaaggaatctgcattcatttcattaactgatattcaaaaaaagacaattcct
atagccttgaaagggcatgatttgatgggaactgccagaactgggtctggtaaaaccttg
gcttttctcattcctgtaattgagcttttgatcaagaatgacattaccgagtacgatgga
ttggccgcgttgattgtatcccccacaagagaacttgcagtacagatttttgaagtcttg
gccaaaattggtaaatacaattcattttctgcaggtttagtcactggtgggaaggatgta
caatatgaaaaggaaaggatatcaagaatgaatatcttggttggaactcctggacgtatc
tcgcagcatttaaatgaagctgtagggatggagacatccaacttgcaggttttagtttta
gatgaagcagatagatgtctcgatatggggtttaaaaagcaaattgataacattataagt
cacttgccaccaacaagacaaaccttactattttcagccaccactacagacagtgttcga
gatttggcccggttgtccttgacgaatccaaagagaataggcacttcctcggaccaagat
gtgtctgcaattcccgaatcattggatcagtattatgttagggtaccgttagaagaaaag
ttggatgtcttgtggtcctttatcaaatcacatttaaagagcaagatcttggtcttcttt
tcatcctcaaagcaagtgcaatatacctatgaatcattccgtacgcttcaacccggtatt
tcgcttttgaagctttatggacgtaataagcaaacgtcgagattggaaacaacaatgaaa
tttgcccaggctcagcatgtctgtctttttgcaactgatatcgtagctagaggtttagat
tttccagcaatagattgggttattcaagttgattgtcccgaggatgtggcaacctatgtt
caccgagtggggagatcagcaagatttggaaggcagggtaaatccttactcatgctaaca
ccaactgaagaggagggttttttgcaaaggctcaaggctcaaaatattgaaccaaagttg
atgaatattaaacaaaagagtaagaaatcaataagaccgcaattgcaatctttatgcttc
aaagatccagtgatgaagaatttaggacaacgagcatttattgcttactttaaatctgta
catatacaaaaggacaaggaggtgtttaatgtcgaagcgttgccagctgaggcgtatgcg
tcatcattgggtcttcctggggcacctaagatcaaaatcaaaggaggttctgctagtaag
gagaaaaagaacgagtcgagaaaattgcttgctttgtcgaaaagtgatgctgacggtgag
gttgaggaaaagccttctaaagtcaagactaaatacgatcgaatgtttgagagaaagaat
caaacgatattgtcagatcattatttgaacttgacaaacagcaaagcaaatggaaaagag
gatgaagaggaagaggacttcatgacagtgaagcgacaagatcatgaattgaaagatgaa
gatttacctgatttgctgttgccagtgtccaagagacaagcaaagaaagcactttccaaa
aaggcatcaatagcagagaagggcaacccaacaaaattgaagtttgacgatgatggcgta
gcacatccaatatacgaattggagggtgaagaagattttatcaaagctggtgatgcaaag
aaacaaaaagaggacttccttaccaaagagcaagaattgatgaaggttacagatgctgct
gataaagaggtggaaagacaaaaacgtcaagaaaagaagagaaagaggaaggaagcagag
agaagaatgagggaggaagaggaacattactctgaaagtgaagaagatattccggacttg
gagcgtgatatggagcttgatgacaaaaagccatctacaagagataccacctggtttaaa
gatgaaccggaagctaagagacaaaagaaggatgagtttattgaaattgatgagccagaa
actttggaggatcttgaatcattggcagctaagttaattagtaactag
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