Candida orthopsilosis: CORT_0E03130
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Entry
CORT_0E03130 CDS
T02488
Name
(RefSeq) hypothetical protein
KO
K12617
DNA topoisomerase 2-associated protein PAT1
Organism
cot
Candida orthopsilosis
Pathway
cot03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cot00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CORT_0E03130
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cot03019
]
CORT_0E03130
Messenger RNA biogenesis [BR:
cot03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
CORT_0E03130
mRNA degradation factors
5'-3' decay
Decapping complex
CORT_0E03130
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAT1
Motif
Other DBs
NCBI-GeneID:
14540853
NCBI-ProteinID:
XP_003870033
UniProt:
H8X6X4
LinkDB
All DBs
Position
5:complement(678530..680971)
Genome browser
AA seq
813 aa
AA seq
DB search
MSFFGFDPTKPPQGAKDDEVYDFENTYDGLGELEEDDAFNTETFGTSVAEIRKDFDFGHD
QPKQSAHLNVLSVPSQTQSYAQAAQAAPVNDDEFMQELWGTSNAPTKVESETQNHGASAG
QPEKKILSLEEIEAQLTAIDQSQQQQSGLPPQGFNQPGSFPPQGYGIPGMIPPPNQFNSY
MFGGYMPPQYGFSGRAPPQQLPPLQGLPPHIQQQYQQQPQSHPQVQPPQGLQNQPQLPTQ
VNVQDQPQAQAQAQAQAQVPVPSREERGIDPPVVQQRPQKVDLSQFPVLGKEALQQHHHA
HQQQVSLHQQQQQQQQSQLKPQRQYNQQPNHQQLQDLTPEQQAKAAKRLEKVSRIMKYSG
IMNPRDKDFVTRFQLSHIVTEDPYNEDFYAQVYKVIHPKVVNGVPQPALGQQNNSIAQAY
LDHSGHRLGGRFKRADVALQRMQQQVQKAVHVAKGRPKFNQYAKEGALGKISFASGKKPR
QQLEIISKAAEREKNEVATDDFKKEDIKRYSRKDIFAILENIISELMNVESESRVSPSVD
TTKLWESMKVLEQASSSGDDEAEVNPFIQCLNYNKMLKILVRLFKFLNREQILTITTLIM
SNLENLSVVKYGSYTTYPDKKVPEKVLKLVDAYSMTFSKILINAVSEFKFNEIIGLLVIL
IEHNNVSFVSTTKIGLTILTTLLSRAELIIGEGQISATDLSEWTSCYDELFTALESRIAA
IFPPHPVDVDDGSSKENYIWQFLATLSLGGKLSHQRIIVDEVRDEIFGAMNRAKAIDNQD
LANLYKKQNLLNNLNMFLVVMGLVADENDIKEL
NT seq
2442 nt
NT seq
+upstream
nt +downstream
nt
atgtcgttttttggatttgacccgacaaagccacctcagggtgctaaagacgatgaagtg
tatgattttgaaaacacctatgatggattgggcgaactagaggaagatgatgcattcaac
acagagacttttggaaccagtgttgcagaaattaggaaagattttgattttggccatgat
cagcctaaacagagtgcccaccttaatgttttatcagtcccatctcaaactcaaagctat
gctcaagcagcacaggccgcaccagtcaatgatgatgagtttatgcaagagctctggggt
acttcaaatgctcctaccaaggtcgagagtgaaacccaaaaccatggagcttctgcgggt
caaccagagaagaagatattatcattggaagaaattgaagctcaattaactgcgattgac
caatcacagcaacaacaatctggacttccaccacaaggctttaatcaaccagggctgttt
ccgcctcaaggttacggaattccaggcatgattccccctccaaatcaattcaatagctat
atgttcggtgggtacatgccacctcaatacggcttttccggtagggcacctcctcaacaa
ttaccaccattacaaggattacctccacatattcagcaacaataccagcaacaaccacaa
ctgcaccctcaggtacagcctccacaagggttgcaaaaccaacctcaacttccgactcaa
gtgaatgtacaggaccaaccacaggcacaggcacaggcacaggcacaggcacaggtacct
gtaccttctcgcgaagaaagaggcatcgatccaccagtggtacagcaaagaccacagaaa
gtagacttgtcccaatttcctgtcttagggaaggaagcgttgcaacaacatcaccatgct
caccaacaacaagtttcgttgcatcagcaacagcagcagcaacaacaatcgcaattgaaa
cctcaaaggcagtacaaccaacagccaaatcatcagcaattgcaggatcttactccagaa
caacaagccaaagcggccaagagacttgaaaaagtgtcgaggattatgaagtattctgga
atcatgaacccgagggataaggactttgtcactagatttcaattgtcgcatatcgtaact
gaagatccttataatgaggatttctatgcccaagtatacaaagtcatccatcctaaagtt
gtcaatggtgttcctcagccagcacttggtcaacaaaacaactcaattgctcaagcttat
ttggatcacagtggtcataggttaggtggacgatttaagagagctgatgttgcgttacaa
aggatgcagcaacaagtgcaaaaggctgttcatgttgcaaagggaagaccaaagtttaat
caatatgcgaaagagggtgctttgggaaagatttcatttgctagtggaaagaaacctaga
caacaattggaaatcattagtaaagctgctgaaagagaaaagaacgaagttgcaactgat
gattttaagaaggaagatatcaagaggtattcacgtaaagatatttttgccatcttggaa
aatattatttcagaattgatgaatgtagaaagtgaatccagagtgtccccaagtgttgat
acaacaaaattgtgggaatctatgaaagttcttgagcaagcatcatcgtcaggtgatgat
gaagctgaagtaaatccattcatccaatgtttgaattacaacaagatgttgaagatattg
gttcgtctattcaaatttttgaaccgtgaacaaatcttaacaatcaccaccttgatcatg
tccaatttggagaatttatcagtagtaaaatatggatcttatacaacgtaccctgacaag
aaagtcccagaaaaagtcttgaaacttgttgatgcatattcaatgacgttttctaagatc
ctaattaatgcggtactggagtttaagtttaacgagattattggattgttggtcattttg
attgaacataataacgtatcatttgtatcaactacaaagataggtctcaccattctcacg
acgttattatcgcgtgccgagttgatcatcggagaaggtcaaatttcagcaactgacttg
tcagaatggacttcttgttatgatgaattatttacggcattggaatcaagaattgctgct
atttttccacctcatccggtcgatgttgatgatggatcatcaaaagaaaattatatttgg
caatttttggccactttatcattgggcggtaaattaagtcatcaaagaattatagttgac
gaagttcgagatgaaattttcggtgccatgaatagagcaaaagcaattgacaatcaagac
ttggccaatttatacaaaaagcaaaatttattaaacaatttgaacatgttccttgttgtt
atgggattagttgctgatgaaaatgatataaaggaactatag
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