Candida orthopsilosis: CORT_0E03810
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Entry
CORT_0E03810 CDS
T02488
Name
(RefSeq) hypothetical protein
KO
K12589
exosome complex component RRP42
Organism
cot
Candida orthopsilosis
Pathway
cot03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cot00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CORT_0E03810
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cot03019
]
CORT_0E03810
Messenger RNA biogenesis [BR:
cot03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
CORT_0E03810
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
CORT_0E03810
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
14541196
NCBI-ProteinID:
XP_003870100
UniProt:
H8X741
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All DBs
Position
5:834690..835592
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AA seq
300 aa
AA seq
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MLLSPSEKQYLYDSLSQSPVIRPDSRSVHQYRPLEATTSFLPGSNGSARIRLSEGSECII
SIKAKVVPIDPDTHNDVSLSNLIDVDVDIVGYRDDSNYVSNLKFQLVNLLHRNFPHEVLQ
LTSRYAFKLFIDCVIISHSSYPLSLISLANYLALKTTRLPLLISDPNDLQVAEYPTFSDD
WDNARTIEEIMMDKKIGSVFKPPIFITIGVVGKNLIFDPSVEEEQVLENGVVVSFYNNKV
ITPITNGNFAVNSNNSNFKGLNKSVLMKCINLCNQYCPAIVKALDTLVEQEGDQGDVSIF
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atgctactatctccatctgaaaaacaatatctatacgactcattaagtcagtcaccagtt
ataaggccagattcacgctcagtccatcaatatagaccattagaagcaacaacatctttt
ttacctggatctaatggatcagcaagaattcgattactggaaggtagtgagtgtataata
agcatcaaggcaaaagtcgtaccaattgatccagacacacacaatgatgtttccctatct
aatttaattgatgttgatgttgatattgtgggatatcgagatgattcaaattacgtttca
aatctaaagtttcaattggtgaatttattacatcgaaatttcccccatgaagtattacaa
ttaacatcaagatatgcattcaagctatttattgattgtgtaatcatcagtcacctgtct
tatcccttaagtttgattagtttggctaattatttagctttgaaaacgacaagattacca
ttgttaatcagtgatccaaatgatttacaagtggctgagtatcctactttctcagacgat
tgggataatgcaaggacaattgaggaaataatgatggataagaaaataggtagtgtgttt
aaaccacctatttttataactattggggtggttggtaaaaatctaatttttgatccatca
gtagaggaagaacaagttttggaaaatggagtcgtggtcagtttttataacaacaaagtc
attactcctataactaatggcaattttgctgtaaactcaaacaactccaatttcaaagga
ttgaataaactggtattgatgaagtgtatcaacttgtgtaatcaatattgtccagcaatt
gttaaagctttggataccctagttgaacaagagggtgatcaaggtgatgtgtctattttc
taa
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