Candida orthopsilosis: CORT_0E05510
Help
Entry
CORT_0E05510 CDS
T02488
Name
(RefSeq) RNA-binding protein
KO
K15560
protein NRD1
Organism
cot
Candida orthopsilosis
Brite
KEGG Orthology (KO) [BR:
cot00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cot03021
]
CORT_0E05510
Transcription machinery [BR:
cot03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
CORT_0E05510
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nrd1-Seb1_dom2
CID
RRM_1
Motif
Other DBs
NCBI-GeneID:
14540787
NCBI-ProteinID:
XP_003870266
UniProt:
H8X837
LinkDB
All DBs
Position
5:1224574..1226628
Genome browser
AA seq
684 aa
AA seq
DB search
MSMERFDQILKELPTLAAPGVSGSRIKELSNIACTDFDKEKESKIVAALYSSCKSAAPSH
KLGTLYVVDSVTRKLKDGAVASNETIDASAPDGTFASAVYKIGQLIESLMDDALEYLLDP
ATINKINKLVEIWEKNRTFNADILKKIKDKHFKSTTPPGSPPKSSVEPVKPTSEPKDSNS
ILSALASLAKGDAENTTAESSSNSAPSVSTHTNATGANDTASLLANLAAASAGQSQPPQQ
QPSGQSNDQQAIFSMLQSLQGGAAGPTSQPSSGGHSSGGIDDYGSGRRGGSRDQTNKRSR
SRSPTRHVKSPAAASSVLALQQNIQNLKQQQAAAAAANQGYQAKSPPQQYQQNHNRNNAP
QQFNTDPAFVPPSAMNGEMNLPGTPHYRPRNVGFDASVPQGTIKVLSRTLFIGGVPRNMD
ERVLAQVLRPFAEIQSVILNSERKHAFVKVYSRKEAEQIITSFNKDNSLPLRTRWGVGFG
PRECCNYQHGISIIPIERLTDADRNWVVNAQWGGTGGQPISSGMVIDEPDIEIGAGISSK
AMSKKMPTNSARNGPKSNRPGEPDEEFVKTTLLPNQQVQMSHGASPGFNTYQQSSVNPLQ
GLFGNSPSPQQQQQQTFPQSQQFPSYPPQGQGQQPLGNNFPSMSQVPNMQGMPGMPNPTQ
FPPGVAEMFMQMMQQQQQQQQPPH
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atgctgatggaaagattcgaccaaattcttaaagagttgcccactttagcagctcctggt
gtgtctggttcccgtattaaggaattgtctaacattgcttgtacagactttgacaaggaa
aaagaaagtaagattgttgctgcgctttattctagttgtaaatcagctgctccttcgcat
aaattaggtactttgtatgtggttgattcagtcactagaaaattaaaagatggtgctgtt
gcatcaaatgaaaccattgatgcatctgctcctgatggaacttttgcatcagctgtttac
aaaatcggtcagttgattgaaagtttaatggatgatgctttggaatatttattggatcca
gcaactatcaataagatcaataaattggtggaaatttgggaaaagaatcgcacatttaat
gcagatatcttgaaaaaaattaaggacaaacatttcaagtcaaccactcctccaggatct
ccaccaaagtcaagtgttgaaccagttaaacctacctctgagcccaaagattctaacagt
attttactggctttggcttccttggctaagggagatgcagagaatactacagcagaatca
agctctaattctgctccttcagtatcaacacacacaaatgctactggtgcgaatgatacc
gctagtttgttggcaaatttggcggcagcttctgctggccaatcacaaccaccacaacaa
caaccatcaggtcaatctaatgatcaacaagctatatttagcatgttgcaactgctacaa
ggtggagctgcaggaccaacttcccaaccatcaagtggtggtcactcatcaggtggaatc
gatgattatggttcaggaagacgtggtggtagtcgtgatcaaacgaacaagagaagcaga
tccaggtcccctacaagacatgttaaatccccagctgctgcttcctcggtacttgctttg
caacagaatatccagaacttgaaacaacaacaagctgctgccgctgctgctaatcaagga
taccaagcaaagtccccaccacaacaatatcaacaaaatcataataggaataatgctcct
cagcagttcaacacagatccagcttttgtccctccatcagctatgaatggtgaaatgaac
cttccaggaacacctcactaccgtccaagaaatgttggtttcgatgcaagtgtaccacaa
ggtacaatcaaggtcttgtcaagaactttattcataggtggtgtccccagaaatatggac
gaaagggttttggcacaagtcttgagaccttttgcagaaatccagtcagttattttgaac
agtgaaagaaaacatgcttttgtgaaagtgtattcaagaaaagaagcagagcagatcatt
acttcttttaacaaagataactcattgccattgagaactcgctggggtgttggatttggc
cctagagagtgttgtaattaccaacatggtatttcgatcataccaatagaaaggttgact
gatgctgataggaattgggtggttaatgcgcaatggggaggtaccggtggtcaaccaata
tcgagtggtatggttatcgatgagccagatattgaaattggagctggtatatcttcaaaa
gccatgtccaagaagatgcccacaaactcggcaagaaatggacctaaatcaaacagacca
ggtgagccagatgaagaatttgtaaagacaacactactccctaaccaacaagttcaaatg
agccatggagctctgccgggattcaacacgtatcaacaatcatcagtcaatccattacaa
ggattgtttggaaacagcccttctccgcaacaacaacagcaacagacattccctcaaagt
caacaatttccatcatacccaccacaaggacaaggacagcaacctcttggtaataacttc
ccatctatgctgcaagtgccaaatatgcaaggaatgccagggatgccaaatccaactcaa
tttccaccaggtgtagctgaaatgtttatgcaaatgatgcaacaacaacagcagcaacag
caacccccacattaa
DBGET
integrated database retrieval system
