Candida orthopsilosis: CORT_0E06200 Help Entry CORT_0E06200      CDS       T02488                                  Name (RefSeq) Nam7 protein   KO K14326   regulator of nonsense transcripts 1 [EC:5.6.2.5 5.6.2.3] Organism cot  Candida orthopsilosis Pathway cot03013   Nucleocytoplasmic transport cot03015   mRNA surveillance pathway Brite KEGG Orthology (KO) [BR:cot00001]  09120 Genetic Information Processing   09122 Translation    03013 Nucleocytoplasmic transport     CORT_0E06200    03015 mRNA surveillance pathway     CORT_0E06200  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:cot03019]     CORT_0E06200 Enzymes [BR:cot01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.3  DNA 5'-3' helicase      CORT_0E06200     5.6.2.5  RNA 5'-3' helicase      CORT_0E06200 Messenger RNA biogenesis [BR:cot03019]  Eukaryotic type   mRNA surveillance and transport factors    Surveillance factors     Surveillance complex      CORT_0E06200    mRNA cycle factors     Common to processing body (P body) and stress granule      CORT_0E06200 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  UPF1_Zn_bind AAA_12 AAA_11 UPF1_1B_dom AAA_30 AAA_19 UvrD-helicase ResIII Viral_helicase1 SLFN-g3_helicase NPHP3_N DEAD Helicase_RecD nSTAND3 PhoH AAA_22 ATPase AAA_10 AAA_16 Motif Other DBs NCBI-GeneID:  14540912 NCBI-ProteinID:  XP_003870332 UniProt:  H8X8A3 LinkDB All DBs Position 5:1396593..1399637 Genome browser AA seq 1014 aa AA seqDB search MSNLISDNLGVTAHLPSSNLNDFSPFDQSQLNTMANEENFDDDDDASYHEHQLRLAHAAH VGALVDSEVEEEEEEEVDEEILQQCEHACAYCGVHTPNSVIKCNTCNKWFCNSKANSTSS HIVTHLVMSRHNQVSLHEESDLGETTLECYNCGNKNVFMLGFVSAKQESVVVILCRLPCA RSKDINWDTSHWQALIEDRQFLSWLAPPPAEDALINSVMVTPQQITKLEAQWRLNRNATI NDIENTDKQEEEVLPILMRYTDGFQYQRSFGPLVKLEADYDKNLKESQALEHIQVKWALG LNNRHLASFTLSTFETTDLKVAVGDEIILRYSGSQGDAWQGQGFILRLPNSYQEEFTLEL NPSKVAPPTHLTTDFTAEFVWKGTSYDRMQQAMKDFATNDDSVSSFIYHKLLGHDVAPVE FDIELPKRFSHPKLTELNVSQANAVRSVLQRPLSLIQGPPGTGKTVTSATIVYHLSRLNK EKILVCAPSNVAVDHLAAKLDSLGLNVVRLTAKSREDVESSVSHLALHNIVNKTAKGELK KLIKLKNEVGELSAEDSKKYIKHLRSSELKILNKCDVVCCTCVGAADKRLSQFKFRTVLV DESTQASEPEVLIPIVKGAKQVILVGDHQQLGPVILDRKAADAGLKQSLFERLVFLGHVP IRLEVQYRMHPCLSEFPSNMFYEGSLQDGVTNADRVVADSSFPWPVIDTPMMFWANYGRE ELSSSGNSYLNRVEAMNVERIITRLFKDGIKPEQIGVITPYEGQRAYLVQFMSMNSTLLN KRDEYLEVEITSVDAFQGREKDFIILSCVRANDTQSIGFLSDPRRLNVALTRAKYGLLVL GNPRALSRNRLWNHLLVHFREKGCLVDGPLDNLQLSMVQLNNYTTANRNLKPGATNQKKP YHGLGAPSTNFSTTNFDSISNVGAGGNDVPYQSRLKNELWPALNQHSQDGEQNDDSAGGG EVYYNESNSISANFYSKLNKLEKSFANGGNRYADENIEDEIKSITSSFAAGLNF NT seq 3045 nt NT seq  +upstreamnt  +downstreamnt atgagtaatttgatttccgataatttgggtgttactgcccatttgccatcatcaaattta aacgatttttcaccatttgatcaatcacaattgaatacaatggcaaatgaagaaaatttt gatgatgatgatgacgcttcctaccatgagcatcaacttcgattggcacatgctgctcat gttggtgctttagttgatagcgaagtagaagaagaagaagaagaagaagtggatgaggaa attctacaacagtgcgaacatgcatgtgcttattgtggagtccacacacccaactcagtt atcaagtgcaatacttgtaacaagtggttttgtaattccaaagccaattcaacaagttca catattgtgacccatttggtcatgtcacgtcataatcaagttagtttacatgaagagtca gacttaggagaaactacattggaatgttataactgtgggaacaagaatgtgtttatgttg ggatttgtctctgctaaacaagaatcggtggttgttattttgtgtcgattaccatgtgct cgatcaaaggatattaattgggatactagtcattggcaagcattgattgaagatcgtcag tttctctcatggttagctccaccaccagctgaagatgcattgattaattcggttatggtt acaccacaacaaattaccaagttggaagcacaatggagattgaatagaaatgccactata aacgatatagaaaacactgataaacaagaggaggaagttttaccaattttaatgagatat actgacgggtttcaatatcaacgctcatttggtcccttggtgaaattggaagctgattat gacaagaatttaaaggaatctcaggctttagaacatattcaagtgaaatgggcattgggg ttgaataatagacatttggcttctttcactctttctacttttgaaactactgatttgaag gttgctgttggtgatgaaattattttaaggtatagtggaagtcaaggtgatgcttggcaa ggtcagggttttatccttagattaccaaactcatatcaggaagaattcactttggaattg aatccatctaaagttgctccaccaactcatttaactactgatttcactgctgagtttgtt tggaaggggacttcgtatgatcgtatgcagcaagctatgaaggattttgcaactaatgat gattcggtttcatcatttatctatcacaaattattaggccatgatgttgctccagttgaa tttgatattgaattgcccaaaagattttcccatcctaaattgacagaattgaatgtatca caagcaaatgccgttagatcagttttgcaaagaccattgtctttgattcaaggcccgccg ggcacaggtaaaaccgttacttcagcaactattgtttaccatttgtcaaggttgaataag gagaaaatcttggtttgtgccccatccaatgttgctgtcgatcatttagcagcaaaattg gactcattgggtttgaatgttgttcggctaacggcaaagtcaagagaagatgttgaaagt tctgttagtcacttggccttgcataatattgttaataagacagctaagggagaattgaaa aagttgataaagttaaagaatgaagttggtgaattatcagctgaggattcaaagaaatac atcaagcatttgcggtcatcagagttgaagatcttgaataaatgtgatgttgtttgttgt acttgtgttggtgctgctgataaacgattatctcagtttaaatttagaaccgtgttggtg gatgaaagtactcaagcttcagaacctgaggtgttaattcctatagtaaaaggagccaag caagtcattcttgttggtgatcatcaacaattgggtcccgtgattttggatagaaaagca gcagatgctggattgaagcaatcactttttgaacgattggtttttcttggacatgttcca atcagattggaagttcaatatagaatgcatccttgtttatcggagttccctagtaatatg ttttatgaaggatcattacaagatggtgtcaccaatgctgatcgagtagtggctgattca tcattcccatggccagttattgatacaccaatgatgttttgggctaactatggacgtgaa gagttgagtagtagtggaaactcctatttaaatagagttgaagccatgaatgttgaaagg attatcactcgattgtttaaagatggtattaaaccagaacaaattggtgttattactccc tatgaaggacaacgagcatatttagtacaatttatgtcaatgaattcaacattgttgaat aagcgtgatgaatatcttgaagttgaaatcaccagtgttgatgcattccaaggtcgtgaa aaagatttcattatccttagttgtgttcgtgctaatgatacacaaagtattgggttttta agtgatccaagaagattgaatgttgctttaaccagagccaaatatggattattagttctt ggtaatcctcgagctttgagtaggaatagattatggaatcatttattggttcattttaga gaaaagggatgtttggtggatgggccattggataatttgcagttgtcaatggttcaatta aataattatactaccgctaatcggaacttgaagccgggcgccaccaatcaaaagaaaccg tatcatggacttggtgcaccttctactaacttttcaacgacaaatttcgattctatttca aatgtcggtgctggtggaaatgatgtaccataccaatcaagattgaaaaatgagctttgg ccggcattaaatcaacatagtcaagatggagaacagaatgatgattctgctggtggcgga gaagtgtattacaatgagtctaattcaattagtgctaatttctattctaaattgaataaa ttggaaaagagttttgctaatggtggaaatcgatatgccgatgagaatattgaggatgag atcaagagtataactagttcgtttgctgctggattgaacttttag

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