Candida orthopsilosis: CORT_0F00260
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Entry
CORT_0F00260 CDS
T02488
Name
(RefSeq) Prp22 RNA-dependent ATPase
KO
K12818
ATP-dependent RNA helicase DHX8/PRP22 [EC:
5.6.2.6
]
Organism
cot
Candida orthopsilosis
Pathway
cot03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cot00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
CORT_0F00260
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cot03041
]
CORT_0F00260
Enzymes [BR:
cot01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
CORT_0F00260
Spliceosome [BR:
cot03041
]
Complex C
Other components
Step II factors
CORT_0F00260
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
WHD_HA2
S1
DEAD
AAA_22
AAA_19
ABC_tran
nSTAND3
ATPase
ResIII
SRP54
nSTAND_NTPase5
AAA_23
Motif
Other DBs
NCBI-GeneID:
14541479
NCBI-ProteinID:
XP_003870385
UniProt:
H8X8V7
LinkDB
All DBs
Position
6:28604..31540
Genome browser
AA seq
978 aa
AA seq
DB search
MTSTQNDQTKANLQREIVKKHLHLQDEESIRLTLDFLAELHRKSPSSFQGFDELVKHNGG
EDFDTAFLREIYNSLNSSSSESAKTDAAIAATDTLLGNVFEGRVISIRPYGAFIRFNNTS
GLCHISQVSYDGSRIAQIDLQPNQKVFVKVINEGRDNKGKISLSMRGINQKSGVDESQER
SKSNRTCEKRVTRPETHSTISSDKIHHEPEIETEIELNDARPSFLRNQEYAETNPSINTI
LSMEGAMSKAAENGSDFARKFREEKLQKEKEKNKASHQRIDPLAEKDKTEKVISEWKASH
KLSSFQNPTKRSIEEQKKSLPVYDMRGDLIQSIRDNQFIVIVGETGSGKTTQIVQYIYEE
GLNVINGESKIIGCTQPRRVAATSVAKRVSEEVGCDLGDEVGYNVRFDDKTTLKTKIKYM
TDGMLEREALTDPEMSKYAVIMLDEAHERTIATDVLFALLKKAALTNPNLKIIVTSATLD
SDKFSVFFNECPILNIPGRTYPVEVLYTKEPEMDYLSAALDTVMQIHISEPSGDILVFLT
GQEEIDTSCEVLAERVKVLGDVASELIILPVYSALPAEMQTKIFEPTPPGSRKVILATNI
AETSITIDGIYYVVDPGYVKLNAYDSKSGMDTLKISPISKAQANQRSGRAGRTGPGKCYR
LYTEQSYTNEMLPNTIPEIQRQNLSHTILMLKAIGIKDVIQFEFMDPPSKNSMMTSLEDL
YMLEALDDDGELTPLGRKMADFPMEPALAKTLIKSVDLNCTEEILTIVAMLSVQTIFHRP
KDRQNLADQRKARFHSTKGDHLTLLNVYNRWCASKYNKDWCRDNFIQERSMRHAKEVRKQ
LQTIMTKHKYSVNSCGPDLDAVRKTLCCGYFKNVAKRDSGEGYKTLSKNETVYLHPSSSQ
FGKNPEYLLYHAIVMTSREYMHHVTVIDPEWLCEFAPKYFKLADPHSQARKKQKIVPLES
FGNRNQKKPLGWWPGQKK
NT seq
2937 nt
NT seq
+upstream
nt +downstream
nt
atgacaagtactcagaatgaccagactaaggcaaacctacagcgagagatagtcaaaaag
catttacatcttcaggacgaagaaagtattagattgactttggattttcttgcagaatta
cacaggaaatcaccctcatcattccagggattcgatgagttagtcaagcacaatgggggc
gaggactttgatacagcctttttgagagaaatctacaactctctcaattcgagctcatca
gagagtgcaaagaccgacgctgctattgctgctacagatacgcttctcggtaatgtgttc
gaaggtagagtcatctccattcgtccctatggagcgttcatcagattcaacaacacctct
ggactttgccacatttctcaagtatcctatgacggatctagaatagcgcagatagatcta
cagccaaatcagaaagtgtttgttaaggtaatcaatgaagggcgcgataataaggggaaa
atatcgctttccatgaggggaattaaccagaaatctggggttgatgagtcacaggaaaga
agtaaatctaatagaacctgtgagaagagagtaacaagaccggaaactcattcgactatt
tcctcagataaaatacaccatgaaccggaaattgagaccgagattgaactaaatgatgcc
aggccatcttttttgagaaaccaagagtatgcggaaacaaacccctcaataaacacaatt
ttgagcatggaaggtgcaatgagtaaagccgccgaaaatggatctgattttgcgagaaaa
tttagagaggaaaagcttcaaaaggaaaaggaaaagaataaagctagccaccaacgaata
gatccccttgcagaaaaggacaagactgaaaaggtgatatcagagtggaaagcatctcac
aaactcagctcctttcaaaaccctacgaagcgttccattgaagagcagaaaaagtcactt
ccggtgtacgacatgcgaggcgatcttattcaactgattagagataaccagtttattgtc
atcgttggtgaaaccggttcaggaaaaactactcaaatagtgcagtacatttacgaagag
ggattaaatgtaatcaatggagaatcaaaaataatcggctgtacacagccaaggcgtgtg
gcagccacatcagtagctaaaagagtgtccgaagaggtaggttgtgatcttggcgatgaa
gtaggatacaatgttcgattcgatgataaaactacactcaagacaaagataaaatacatg
actgatggtatgttggaaagggaggctcttacggatccagaaatgagcaagtatgcggtg
ataatgttggacgaggcacatgagaggacaattgccaccgatgtactatttgctttgtta
aaaaaggcagcacttacaaatccgaatttgaagataattgtcacttcagctactttggat
tctgataagttttccgtgtttttcaatgagtgtccaattttgaacattcctggtagaact
taccccgtggaggtgctatacacaaaagagccagagatggattacttatcagcggctttg
gatacagttatgcaaatacacatttcggaacctagtggagatatattggtgtttttgact
ggacaggaggagattgacactagttgcgaagtacttgccgaacgagtgaaggtgttggga
gatgtagcctctgagcttattatcttacctgtctactcagcattaccagccgaaatgcaa
accaagatatttgagcccacgccgccaggatcgcggaaggtaattttggcaacaaacatc
gccgagacatcaattacaatcgatggtatatactacgtcgttgacccaggatacgtcaaa
ttgaatgcttatgattctaaactgggaatggacacactaaagatatctcccattagcaaa
gctcaagccaatcaacgaagcggaagagccggtagaactggaccaggaaaatgttaccgc
ttgtacactgagcagtcgtataccaatgaaatgcttccaaatacaatacccgaaatacag
agacaaaacttgtcgcatacaatcctaatgttgaaggcaattggtatcaaagatgttatc
cagtttgagtttatggaccctccttcaaaaaattcaatgatgacttcgttggaagatctt
tacatgttggaagcgttggatgatgatggagaactaactcctctaggacggaaaatggct
gattttcccatggagcctgcacttgcgaaaacactcatcaagtcggttgatttaaactgt
acagaagagattttaaccattgttgctatgctctctgtgcaaaccattttccatcgaccg
aaggataggcaaaatcttgctgatcagcgtaaggcaagattccactctaccaagggtgac
cacttgaccttgcttaatgtatataaccgttggtgtgcaagtaagtacaataaagattgg
tgtcgagataatttcatacaggagaggagtatgcgacacgctaaggaagttcggaagcaa
cttcaaacaataatgacaaaacacaagtattcagtgaactcatgtggccctgatctagat
gcagttaggaaaactttatgctgcggttactttaaaaacgtagctaaacgtgactccggc
gagggctataaaactttatcaaagaacgaaacggtttatctacatccgtcttcaagtcag
tttggaaagaatcctgaatatttattgtaccatgcaattgttatgacctcgcgtgaatac
atgcatcatgtcaccgtcattgatcccgaatggctttgtgaatttgctccaaagtatttt
aaactagctgatcctcacagtcaagccagaaagaagcaaaagattgtaccattagaatcg
tttggaaatcgtaaccaaaagaaaccattgggatggtggccaggtcagaaaaaataa
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