Candida orthopsilosis: CORT_0F01520
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Entry
CORT_0F01520 CDS
T02488
Name
(RefSeq) Has1 protein
KO
K13179
ATP-dependent RNA helicase DDX18/HAS1 [EC:
5.6.2.7
]
Organism
cot
Candida orthopsilosis
Brite
KEGG Orthology (KO) [BR:
cot00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cot03041
]
CORT_0F01520
03009 Ribosome biogenesis [BR:
cot03009
]
CORT_0F01520
Enzymes [BR:
cot01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
CORT_0F01520
Spliceosome [BR:
cot03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
CORT_0F01520
Ribosome biogenesis [BR:
cot03009
]
Eukaryotic type
90S particles
Helicases
CORT_0F01520
Pre-60S particles
CORT_0F01520
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
SecA_DEAD
Cas3-like_C_2
TssR
Gal80p_C-like
AAA_22
Motif
Other DBs
NCBI-GeneID:
14541554
NCBI-ProteinID:
XP_003870508
UniProt:
H8X980
LinkDB
All DBs
Position
6:complement(288199..289920)
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AA seq
573 aa
AA seq
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MAKNSTGKKTSKKPSMESSKHSKKRTRDESESESDVEVDTEKAVDQLDDEFDEVAGLLGQ
DIKDPEEKEANKKQAEDEKRLQELTKPKVVDSTETKGDDEDEPEDNYSFEKAEFSEPTMK
AIREMGFKKMTKVQAKTIPPLLAGRDVLGAAKTGSGKTLAFLIPAIELLYSLKIKPRNGT
AVIIITPTRELALQIFGVARQLMEHHSQTCGIVIGGADRRQEATKLAKGVNLLVATPGRL
LDHLKNTQGFVFSNLKALIIDEADRILEIGFEEEMKQIIKILPNEDRQTMLFSATQTTKV
EDLARISLRPGPLYINVVPEKDVSTADGLEQGYVVCDSDKRFLLLFSFLKRNVKKKIIVF
LSSCNSVKFYSELLNYIDLPVLDLHGKQKQQKRTNTFFEFCNAKQGILVCTDVAARGLDI
PAVDWIIQFDPPDDPRDYIHRVGRTARGTQGKGKSLMFLTPSELGFLRYLKAANVPLNEY
EFPTNKIANVQSQLTKLIKTNYLLHQSAKDGYRAYLQAYASHSLKTVYQIDKLDLVKVGK
SFGFDVPPKVNITIGASGKSIEKKHKKQRRDKK
NT seq
1722 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagaattcaacaggcaagaagacttctaaaaagccatctatggaactgtcaaag
cactctaagaagagaacaagagatgaatcagagtctgaaagtgacgttgaagtagacacc
gaaaaggctgtggatcaattagatgatgagttcgatgaggtagcgggacttcttggacaa
gacatcaaagatccagaagagaaggaagctaataagaaacaagcggaggatgagaagagg
ttacaggagttgactaagccaaaagttgttgattcaactgagactaaaggggacgatgaa
gatgaacctgaagacaactactcctttgaaaaagcagaattttcagaaccaacaatgaaa
gccattagagaaatggggtttaagaaaatgaccaaggtgcaggccaaaacgataccccca
ttgttggcgggaagagatgtattgggagcagcaaagactgggtctggaaagacattggca
tttttgattccagcaattgagctcttgtattcattaaagatcaaacctagaaatggtaca
gcggttattatcatcacaccaactagagaattggcactacagatttttggagttgctcga
caattgatggaacatcattcacaaacttgtggaattgtaattggaggtgctgatcgaaga
caagaggcaactaaattggcaaaaggggtcaatttattagttgctacaccaggaagactt
ttggatcatttgaaaaacacccagggttttgtatttagtaatttgaaagcattgattatc
gacgaagctgatagaatattggaaattgggtttgaggaggaaatgaaacaaattatcaaa
atattacctaatgaagatagacaaacaatgttgttttcagctacacaaactactaaagtt
gaagatcttgcccgtatttcattgagaccaggtccattgtatataaatgtcgtcccagaa
aaagatgtatccacagctgatggattggaacaagggtacgtggtgtgtgattcagacaag
agatttctcttgttgttttcgttcttgaaaagaaatgtcaagaagaagattattgtgttt
ttatcatcctgtaacagtgtcaaattttacagtgaattgctcaactacattgatttacca
gtattggatcttcatggcaaacaaaaacaacaaaaacgtacaaatacattttttgaattt
tgtaacgccaaacaaggaatattggtgtgtactgatgttgcagctagaggcttggatatt
cctgctgttgattggattattcaattcgatccaccagatgatccaagagattacatccat
agagtcggtagaacagcaagaggtactcaaggtaaaggaaaatcactaatgtttttaaca
ccatctgaattgggattcttgagatatcttaaagccgctaatgtaccacttaatgaatac
gaatttccaacaaataagattgccaatgttcaatcacaattgactaaacttatcaaaact
aattatttgttacaccaatctgctaaagatgggtatagagcatatctacaagcctatgct
tcccatagtttgaaaactgtctatcaaattgataaattagatttggttaaggtgggtaaa
tcttttggttttgatgtacctccaaaagtaaatattactattggagccagtggcaaatca
attgaaaagaaacataagaaacaaaggagagataagaagtaa
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