Candida orthopsilosis: CORT_0F01720
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Entry
CORT_0F01720 CDS
T02488
Name
(RefSeq) Pan3 protein
KO
K12572
PAB-dependent poly(A)-specific ribonuclease subunit 3
Organism
cot
Candida orthopsilosis
Pathway
cot03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cot00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CORT_0F01720
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cot03019
]
CORT_0F01720
Messenger RNA biogenesis [BR:
cot03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
CORT_0F01720
mRNA degradation factors
3'-5' decay
Pan complex
CORT_0F01720
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pan3_PK
Pkinase
LupA
Motif
Other DBs
NCBI-GeneID:
14541771
NCBI-ProteinID:
XP_003870528
UniProt:
H8X9A0
LinkDB
All DBs
Position
6:335869..338244
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AA seq
791 aa
AA seq
DB search
MNINLDTAKDVLCKNVLIYGYCKYQDKGCAFSHHKSTGLQSGGAGNGEGNGQEPESQADQ
LQAQPSQQLKSKQSRSRLQQQQQQQQQQQQQQQIPLTGTASAKSTESNNGRRKFNIETPL
FQPSGGNDRLISGITSKFSNLSPTVKDAPIFQPESLASFQGQDGIQSPQQRQQSQNNSSA
FQFGAKKFNVSTPSFTPSNFDFSPGVSGTTSNQPQPHQQQQQQHHHHFSGPPQSLPPNGP
SSARSLGGVIQPQQPSSNPYLQNTQSPLASGNQMPHSSLMNSAPPISSNFFPSSQSHPHH
QGSGLEGNAVAGAAPAPPTSQHQQQQQAPLYPLQYHLYAPVPPPRLTVPIRDYETNALKM
FIPNDLRENLHRRNEASLQTLQHSNLPEHVNSYHSLVPIDTSYDAVSKIWPGKNSLLFKC
YSNNDGNLYVLRKIEPCNEITDESTFKSIKKWQKLRSNANIVGIKDVFTSLAFSSISGTK
VENTTALCFVYDYYPNSKTLLERHKKSLRVEPITEDLLWTYLVQLVNALKEIHANGLSAG
SSMEVSKIINTGENRIRLSSCGISDVLDYGKQDSPDVGQLQRQDIKNLGKVLLDLSSLLL
PINLRSSQEDVLMRNLTNSTNLSDDFIKVLKVLDEIAVSPDNDVPDFNMKQFISDYLIDK
TFSTVNSIQNSSDYFESQLTSELENSRLFRLLTKINFVVNTTTIGDNNLNKLSLNDANQI
KIIQLFQQNLFQFYDPNGARVINLHKVLVNLNKLDCGVDEKLLLVNENECIIVSYKEVKE
IIDCQFRQLKN
NT seq
2376 nt
NT seq
+upstream
nt +downstream
nt
atgaatatcaatctagatacagcaaaggatgttctttgtaaaaacgtgttgatatatgga
tattgcaagtatcaagataaaggatgtgcttttagccatcataaactgacaggattgcag
tcgggtggagctggaaatggagaaggcaacgggcaagaacctgaatcacaggcggatcag
ttgcaggcgcaaccgctgcaacaattgaaatctaaacaatcgcgatctcggttacaacaa
caacaacaacagcagcagcagcagcagcagcagcagcaaataccccttactgggaccgct
tcagcaaaatcaacggaatcaaataatggacgaagaaaattcaatattgaaactccgttg
tttcaaccaagtggtgggaatgatcgattgattagcggtataacttcaaaattttcaaat
ctctctccaacagttaaggatgcaccaatttttcaacctgaatcgcttgcatcatttcaa
ggtcaagatgggatacaatccccacaacaacggcaacaatctcagaataacctgtctgct
tttcagtttggagcaaagaagttcaatgttagcacgccatcatttacaccgtccaatttt
gatttttctccgggtgtatctggaacaacctccaaccaaccacaaccacatcaacaacag
cagcagcaacatcatcatcatttctctggcccaccgcaaagtctccctcccaacggccct
tcaagtgcaaggtcactaggtggagttatacaaccacaacagccctcatctaacccatat
cttcagaatacccaaagtccattggctctgggaaatcaaatgccgcactcatcacttatg
aactcagcaccaccaatttcatccaatttttttccatcgctgcaaagtcatcctcatcat
caggggtcaggactagaaggaaatgctgtggccggtgcagcgcctgcaccaccaacttcg
caacatcaacagcagcaacaagcaccattgtatccactacaatatcatttgtatgcccct
gtaccaccacccagattaaccgttcctataagagattatgagactaatgcattaaagatg
ttcatccccaatgacttaagagagaatttgcaccgtagaaatgaagcaagtttacagacc
cttcaacatctgaatttgcctgaacacgtaaattcctaccattcattagtccccatagat
acatcctatgatgccgtaagtaaaatttggcccggtaagaatagtcttttgttcaaatgt
tattcaaacaatgatgggaatttgtatgtattgagaaaaattgagccttgcaatgaaatc
actgatgaaagtacattcaagagtataaagaaatggcagaaactcagatccaatgccaac
atagtcgggatcaaagacgtatttacatcgttggccttcagttcaattagtggaactaaa
gtggaaaataccaccgctttatgttttgtttatgattactatcccaattcaaaaacattg
ttggagcgtcataagaaatcattgagagttgagccaataacagaggatcttttgtggacg
tatctcgttcaattggttaatgcattaaaggaaatacatgcaaacgggttaagtgctgga
tcatctatggaagtgagcaagattatcaataccggagagaataggattagattgagcagc
tgcggaattagtgatgtgttggattatggtaagcaggacagccctgatgtaggacaattg
caacgtcaagacattaaaaatttgggtaaagttttgcttgatttgagctcgttgttgctt
ccaataaatttaagatcgagtcaagaagatgttttgatgaggaacctaacaaattcgact
aacttgagtgatgattttataaaagttttgaaagtattggatgaaattgcagtctcacct
gacaatgatgtaccggatttcaatatgaaacaattcatcagtgattatttaatcgacaag
acattttccactgtcaacagtatacaaaactcaagtgattattttgaactgcaattgact
tcagaattggaaaattctcgattatttagattattaaccaagattaatttcgtggttaat
accaccactattggagataacaaccttaacaagttgtccttaaatgatgccaatcaaatc
aagattattcaattatttcagcaaaatttgtttcaattttatgatcccaatggagctaga
gttatcaacttgcacaaggttttggttaatttgaataagctcgattgtggagttgatgag
aaattgttattggtgaatgaaaatgaatgcatcattgttagctataaagaagtgaaggag
attattgattgtcaattcagacagttgaaaaattag
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