Candida orthopsilosis: CORT_0F02600
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Entry
CORT_0F02600 CDS
T02488
Name
(RefSeq) Tsm1 transcription initiation factor TFIID subunit
KO
K03128
transcription initiation factor TFIID subunit 2
Organism
cot
Candida orthopsilosis
Pathway
cot03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
cot00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
CORT_0F02600
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cot01002
]
CORT_0F02600
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cot03021
]
CORT_0F02600
03036 Chromosome and associated proteins [BR:
cot03036
]
CORT_0F02600
Peptidases and inhibitors [BR:
cot01002
]
Metallo peptidases
Family M1
CORT_0F02600
Transcription machinery [BR:
cot03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
CORT_0F02600
Coactivators
SAGA/TFTC/STAGA complex
CORT_0F02600
Chromosome and associated proteins [BR:
cot03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
CORT_0F02600
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M1_N
Peptidase_M1
ISP1_C
Motif
Other DBs
NCBI-GeneID:
14541442
NCBI-ProteinID:
XP_003870613
UniProt:
H8X8K9
LinkDB
All DBs
Position
6:539723..543838
Genome browser
AA seq
1371 aa
AA seq
DB search
MPSAIPNDLASHMGTPRLIDGLSQHTPKPRSNGRTSSPFHFAKQQLFKVGHQKVSIDVNL
SSNSIEGITEISVIPLSAKLKVIKLDCRELKVKEIYINGSPNANYIYDDVLFINDPSITS
EAIENNEINVLDLYSDKFDIHQHHFIKRKLNYIFGERYTPEDEEESDFSGQGTQELKILL
PENIKFEPTDINSITTPRGSQPNTMTPTHLKSKHTISEVYKPIQIKIVYELKNPKNGVNF
ITNDDIEKKLWHAYTTNSEYNVSTSSWVPCLDNFNNRCTWSLDVSVPRTLKDIGNPRIIG
SKEAIAYQKRTKNTLSTDGNELENEDGEDDEDNPDLIVCSADTNNVKEAPHPIDLSKKVV
SWSIFNPVSAHHIGWALGFFESIILNDGSQTAEGDEINSMDVDDEYNDKDSSSSSVTIYA
LPSDMELAKNTCLVASRALSYYSSEFGSYPFSSYVIVFVKFSPVKSNGFAGLSILSTSLL
YPPNLIEPMFISTDILLTSIAAQWSGINIAPHSFDDIWCTSGIAGFMAISFVQKLMGTNE
FRFKVKELVQTIVEQDVDKRPIAHPFLKFPVSDLDLEFIRLKSQIVFFILDNRMTKTDKS
FGLSRVIPKLFLQALSGDLPNGTLSTDHFQYVCEKVNRNKLDSFFKQWVFGSGAPSFKIS
QRFNKKKGMIEMTIRQVQHHENKTVRLNAESFIDDALCFINKEPLPQRQNVFTGPMNIRV
HESDGTPYEHIIHIKEVKTTIDISLSKKVRKIKKKDEGVDPGINFNQFGDILISEEDKRK
WELQDWESRDEDSLGAEPFEWIRGDIDFEWIAKIEVLQPDFMYGSQLVYDRDVEAQFDAL
RYFGNLEKPSVIYCTALVRTFLDERYFYRIRIAAAEALATCSNASNDFIGMKYLIKAYKH
LYCFPDSSIPKANDFNDFKLFLIQRAVPGILCRITDDEGRVPKDVQDLLFNFVKFNDNAM
NDYQDTLYLSDLIKALTTSAISGWRKDTAEGNNQEFAHKVNAEITRLQKLDEWRPSYQRI
LQTTCFKSRVQMALYGAITLSLEEMMMATVDKFPMDLRAEAFKGLLLLSGFRSTPILEYF
LKVCLLYFHRPLYTRKLVGVLLESITMIALEGSFVPVKESPDDNRQPGLVSTSMIIIDEG
ANSDMKARHDLHARATLKGAIDLLRRDYSNIGSLKHVFWTFLHSALLSNFVKRNLFLMAE
ILYEERDTLIVKLPVPSLPIAEFKKKVVARNLGDGQVVLRREGRFKIQLISRKPSSHPPN
RKTHKSEETNKPKPSLRISFKLQQDRLFERNEKETSINEKYVPRSSSLVKFDPSSHSRVS
IKLPTHVLKTIASKPIVINQESLVSVKGTIVKINFKKHSKDKQTAQNVHTV
NT seq
4116 nt
NT seq
+upstream
nt +downstream
nt
atgccctcggcaattccaaacgacctagcttctcacatgggtacgcccaggctcatagac
gggctactgcagcataccccaaagccaagactgaatggacgaacatctagtccatttcat
ttcgcaaagcaacagcttttcaaagttggtcatcaaaaagtaagcattgatgtgaattta
tcatccaactcgattgaaggaattactgaaattagtgtgataccattatctgctaagcta
aaagtaatcaagttggattgtcgagaactaaaagtgaaggaaatttacataaatggatcg
ccaaatgcaaattacatctatgacgacgtgttgtttatcaatgacccttctatcacatcc
gaagccattgaaaataacgaaataaatgtacttgatctttattccgataagtttgatatt
caccagcatcacttcattaaaaggaaattgaattatatatttggcgaacggtatacacct
gaagatgaagaagaatctgacttttcaggacaagggacacaggaactcaagatactacta
ccggaaaacatcaaatttgaacccactgatatcaactccatcacaacacctcgtgggagt
caaccaaataccatgacaccaacacatttgaaatctaaacataccattagcgaagtgtat
aaaccgattcaaatcaaaatagtctatgagttaaagaatcctaaaaatggtgtcaacttc
atcacaaatgacgatatcgaaaagaaactatggcatgcatacacgacgaactcagagtat
aacgtttccacttcttcgtgggttccttgtctcgacaacttcaataatcgatgtacatgg
tcattggatgtaagtgtcccacgaacattgaaagatattggcaacccaaggataattggc
tcgaaagaagctatcgcttatcaaaagcgtactaaaaacacactttcaactgatggaaac
gaacttgagaatgaggatggggaagatgatgaggacaaccctgacttgattgtatgctct
gctgatacaaacaatgttaaagaagcaccacatccaattgacttgtccaaaaaagtggta
tcgtggtctatcttcaatccagtatctgcacaccatattggttgggcgttgggatttttt
gaaagtataattttgaatgatggatcacaaactgctgaaggcgatgaaatcaactccatg
gacgttgatgacgaatacaatgacaaggatagttcgagctctctggtgacgatatatgca
ttaccctccgacatggaactagccaaaaatacttgtcttgttgcaagcagagcattgagc
tattatctgagtgaatttggttcttacccattcagttcttatgtgatcgtatttgtcaaa
ttttcacctgtgaaaagcaatggatttgctggattatcgatcttgtcgacgtcattactt
tatcctcccaatttgatagaacccatgtttatttcaacagacatcttgttaaccagtata
gccgctcagtggtctggaatcaacattgctcctcattcatttgacgatatttggtgtacc
ctgggtatagctggtttcatggcgatctcctttgttcaaaaactaatgggaacaaatgag
ttcaggttcaaggtcaaggaactagtgcaaactatagttgaacaggatgttgacaagaga
cctatagctcatccgtttttaaagttccctgtatctgatttggacttggaatttataaga
ttgaaatcccagattgttttctttatattggacaacagaatgacaaagacggacaaatca
tttggtttgtcaagggtcattcccaaactttttttgcaagcattatcgggagatttaccc
aatggaaccttgagcaccgatcattttcagtacgtttgtgaaaaggtgaatcgaaataaa
ttggacagttttttcaagcaatgggtttttggttctggtgctccaagctttaaaattagc
caacgtttcaacaagaagaaagggatgatcgaaatgaccataagacaagtacagcatcat
gaaaataaaacagtgcgattaaacgccgagtcgtttatagatgatgcgttatgcttcatt
aataaggagcctcttccacagagacaaaatgtgtttaccggtcctatgaatataagggtc
catgagtccgacggtactccatacgagcacattatccacatcaaagaggtgaaaaccacc
atagatattctgctatccaaaaaggttcgaaagattaagaagaaagatgaaggagtagat
cctgggattaattttaatcagtttggagatattctcatcagtgaagaagacaagagaaaa
tgggagttgcaagactgggaaagtagggatgaggactctttgggtgctgagccgtttgaa
tggatacgaggtgacattgattttgaatggattgccaaaattgaagtattgcaaccagat
ttcatgtatgggtcccagcttgtttacgatagagatgttgaagcacagtttgatgctttg
cggtactttggtaaccttgagaaaccttctgtcatttattgcacagcacttgttcgtaca
tttttggatgagcggtatttctaccgtataagaattgcagccgcagaagcacttgctacg
tgttccaatgcttcaaacgactttattggaatgaagtatctaattaaagcatacaaacac
ttgtattgtttcccagacagctcaatacccaaagcaaatgatttcaatgatttcaaatta
tttttaattcaaagagcggttcctggaattttgtgccgaatcacagatgatgaaggcaga
gttcccaaggatgtgcaggatcttttattcaactttgtaaagttcaacgataacgcaatg
aatgactatcaagacactttatatttatctgatctcatcaaggcgttaacaactagtgct
ataagtggatggcgtaaggatactgcagaaggaaataaccaggaatttgctcataaagtt
aacgcggaaattactcggttacaaaaacttgatgaatggagaccttcttatcaaagaata
ctacagactacgtgtttcaaatcgagagtgcagatggctctatatggagcaatcaccctt
tcgctagaagagatgatgatggccacggtggacaagttccctatggatttacgtgctgaa
gcattcaagggacttttgttactcagtggcttccgctcgacacctattcttgaatatttt
cttaaagtgtgtttgttgtactttcatcgtcctttgtacacaaggaaactcgttggtgtg
ctacttgagtcgattacaatgatagcacttgaaggaagctttgtcccagtcaaagagtcg
cctgatgataatcgtcaacctggtttagtgctgacaagcatgatcattattgatgaggga
gccaattcagacatgaaggcaaggcatgatttgcatgctagagccactttgaagggggct
atagatttattgaggcgtgattattcaaatattggaagtttaaagcatgtgttctggaca
tttttgcattcagctttgttgagcaattttgtcaagcgcaatttatttttgatggccgaa
atcctttacgaagaacgagacacccttatagttaagctacctgtaccaagtttgccaata
gcagagttcaagaagaaggttgttgcgagaaatttgggagatggacaagttgttttaaga
agggaaggtaggtttaaaattcaattgatatcacgtaaaccgctgagtcatccacctaat
cgaaagactcataaatctgaggaaacaaataagccaaagccctccttgagaatatccttc
aaattgcaacaagacaggctttttgaaagaaatgagaaggaaacatcaatcaatgagaaa
tatgtgccacgatcatcgtctttagtgaaattcgatccctcatcccattctcgtgtactg
atcaaattacctactcacgttttgaaaaccattgccagtaagccaattgttataaaccaa
gaatcgttggtgtctgtaaaaggaacaatagtcaagatcaacttcaagaaacactcaaaa
gataaacagactgcacaaaacgtacatacggtttaa
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integrated database retrieval system
