Lodderomyces orthopsilosis: CORT_0F03210
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Entry
CORT_0F03210 CDS
T02488
Name
(RefSeq) Chc1 protein
KO
K04646
clathrin heavy chain
Organism
cot
Lodderomyces orthopsilosis
Pathway
cot04142
Lysosome biogenesis
cot04144
Endocytosis
cot05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
cot00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
CORT_0F03210
04142 Lysosome biogenesis
CORT_0F03210
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
CORT_0F03210
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cot04131
]
CORT_0F03210
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cot04147
]
CORT_0F03210
Membrane trafficking [BR:
cot04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
CORT_0F03210
Exosome [BR:
cot04147
]
Exosomal proteins
Proteins found in most exosomes
CORT_0F03210
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Clathrin
Clathrin_H_link
Clathrin_propel
Clathrin-link
TPR_COPA_B
VPS18_solenoid_2nd
Sec23_BS
Motif
Other DBs
NCBI-GeneID:
14541661
NCBI-ProteinID:
XP_003870674
UniProt:
H8X8S0
LinkDB
All DBs
Position
6:complement(662221..667128)
Genome browser
AA seq
1635 aa
AA seq
DB search
MSDIPIDFTELTQLTQLGISQSSLDFKSTTLESDHYICIRESGPSGNTVAIVDLKNNNEV
TRKNMSADNAIMHPQEFVISLRANGTTLQIFNLGSKQRLKAYTMDEPVIFWKWLDNQHLG
LVTQSSIYFWNVFDGTNDGPIKLTDRHHTLNNAQIINFVAEPDLNWFAVTGIAQEDGRIA
GHIQLYSRSRNVSQPIEGHVCKFASLTLSGAVQPTKVFCVGNKNAQGQGNMHIIEIDHVD
GNPPFQKKVVDIFFPPDASNDFPISLQASNKYGIVYILTKYGFIHLYDMESGSNLFVNRI
TADPVFTASSYNNGTGLLTINKSGQVLSVEVSRDKIIPYVLEKLANVPLAISLAGRGGFP
GAENLLNQQFQTYLNQGDYTNAAKVAASSEQLRTQDTINKLKHITPQPGQISPILQYFST
LLDRGTLNKYESIELAKPVLQQDRKPLFEKWLKEDKLTSSEELGDIVKSYGDAALALAVY
IRANVNIKVVSCLAELGQFDKILPYCQKVGYNPDYTNLIQNLVRVNPDKASEFATSLLSG
DTQLNVEQIADLFFSQNYIQQGTAFLLDALKNDSPSEGHLQTKVLEINLLHAPQVADAIL
GNQMFSHYDKPTIGKLCEKSGLYQRALEHYDDLKDIKRVIVHTNVLPNDWLVSYFGQLNV
DQSIACLKELFSHNLQQNLQVIIQVATKYSDLLGAKKLIKLFEEYKCTEGLYYYLSSIVN
LTQDPDVVFKYIQAAAKIGQTKEIERVVRDNNVYNGEKVKNFLKEANLEDQLPLVIVCDR
FGFVHDLILYLYKNKHFKFIEVYVQSVNPENTPQVIAGLLDVDCDESIIKNLLMSVLGRV
PIKPLVEEVEKRNRLKILLPYLEKTLEGGSNDQEVYNALAKIYIDSNNSPEKFLQENNNY
DTLTVGKYCEKRDPYLAYICYAKGGNDDALIEVTNENKMYKYQARYLLQKSDLDLWNKVL
SSDNVHRRQLVDQVISTGIPELDDPEPISITVKAFMENELPEELMELLEKIILEPSPFSE
NASLQGLMILTAIKADPSKVSNYIEKLDKFDPLEIAPLCIDNGLNEEAFEAYDKFELRTE
AMKVLIEDIVSLDRAEQYAEKYDTSELWYQLGTAQLDGLRIPEAIDSYVKSKNPENYAQV
IEIAEHAGKEEELLPFLEMARETLREPVIDGAFINVYASLDRLGDMENFVSGTNVADLEA
IGDKLFEAKNYKAAKILYSNVSKYSKLATTLVYLGDYQAAVDCARKASNTEVWKQVNNAC
IENKEFRLAQICGLNLIIDAEELPELVKTYEYNGYFSELIALFESGLGLERAHKGMFTEL
AILYSKYSPEKVMEHLKLFWSRINIPKVITACEEAHLYPELIFLYCHYEEWDNAALTMID
KSEVAFDHSSFKEIVVKAPNLEIYYKAIQFYINEQPSLLVDLLSVLSPRLDLPRVVRMFV
KSDNLPLIKPFLVSVLDKNNRVVNDAYHSLLIEEQDHKALRDAIHSYDRFDQIDLAERLE
NHSLVYFRQISALLFAKNKKFNKSISILKKDGDWVNLLKVASGSNQKVVHEVLDYFVSTG
NYEALVALLYTCYHLIDSTYVAEIAFEYQLGNFVAPYKIYKDHVREQQLIELFKRLPSKE
EETEENEQPKFMLTY
NT seq
4908 nt
NT seq
+upstream
nt +downstream
nt
atgtccgatattccaattgatttcaccgagctcacccaattaacccaattgggtatctcc
caatcatcattggacttcaaatccactactttggagtcggatcattacatatgtattcgt
gaatcgggtccactgggtaatactgttgctatagttgatttgaaaaataacaatgaagtt
acaagaaagaatatgtcagcagataatgctataatgcatccacaagaatttgtcataagt
ttaagagcaaatggaaccacattgcaaattttcaatttgggatctaaacaaagattaaaa
gcttatactatggatgaaccagtcatattttggaaatggcttgataatcaacatcttggt
ttagttacacaatcactgatttatttctggaatgtgtttgatggtactaatgatggtcct
attaaattgaccgataggcatcacacattgaacaatgctcaaataatcaactttgttgct
gaaccagatttgaattggtttgccgttactggtattgctcaagaagatggtagaattgct
ggccacattcaattatactcgaggtcgagaaacgtttctcaaccaattgaaggtcacgtt
tgtaaatttgcttcattgactttaagtggagctgtacaaccaaccaaggtattttgtgtt
ggtaacaagaatgctcaaggacaaggaaacatgcatataattgaaattgatcatgttgat
ggaaatccaccatttcaaaagaaagttgttgatattttcttcccaccagatgctagtaat
gatttccctataagtttacaagcttcaaacaagtatgggattgtttacattttgacaaag
tatgggtttatccacttgtatgatatggaatctggatctaatttatttgtcaacagaatc
actgctgatccagttttcactgcatctagttacaataatggaactgggttattaactatc
aacaaatcaggtcaagttttgagtgttgaggttagcagggacaagattattccatatgta
ttggaaaagttagccaacgtgcctttggctatttctttagctggtcgtggtggattccca
ggtgccgagaatttgcttaaccaacaattccaaacatatttaaaccaaggtgactacacc
aatgccgctaaagttgctgcttcttctgaacaattgcgtacacaagataccatcaacaag
ttgaaacatattactcctcaaccaggccaaatttcaccaatattgcaatatttctcaact
ttgttagataggggtactttgaacaagtatgagtctattgaattagctaaaccagtcttg
caacaagatcgtaagccattgtttgagaaatggttgaaggaagataagttgacttcatct
gaagagttgggggatattgtcaaatcttatggcgatgcagccttggctttggcagtgtat
atcagagctaatgtcaacatcaaggttgtttcatgtttggctgaattgggtcaatttgac
aagattttgccatactgtcaaaaagttggttacaatcctgattatactaacttgatccaa
aacttggttagagtcaaccctgacaaggctagtgaatttgccacttccttattatcaggt
gatacacaattgaatgttgaacaaattgcagatttattcttttcgcaaaactacattcaa
caaggtaccgctttcttattggatgcattgaagaatgattcaccatccgaaggacatttg
caaaccaaggttttggaaatcaatttgttgcatgctccacaagttgccgatgcaatttta
ggaaaccaaatgtttagtcattatgataaaccaaccattggtaaattgtgtgaaaaatct
ggcttgtaccaaagagctttggaacattatgatgatttgaaagatatcaaaagagtcatt
gttcacaccaatgtattgccaaacgactggttggtttcatactttggtcaattgaatgtc
gatcaatccattgcttgtttgaaagaattgtttagtcacaacttgcaacaaaatttacaa
gtgattattcaagttgctacgaagtattctgatttacttggtgctaaaaagttgatcaaa
ttgtttgaagagtacaaatgcacggaagggttgtactactacttgagttctattgtcaac
ttgacccaagacccagatgttgttttcaaatacattcaagcggcagcaaaaattggccaa
acaaaagaaattgaaagggttgtcagagataacaatgtctacaatggtgagaaggtgaag
aactttttaaaagaggccaatttggaagaccagttgcctttggttattgtttgtgataga
tttggatttgttcatgatttgattttgtacttgtacaagaacaagcactttaaatttatt
gaagtttatgttcaatcagtcaaccctgaaaacactcctcaagttattgctggattgtta
gatgttgattgtgatgaatctataatcaagaacttgttgatgtcagtattgggtagagta
ccaatcaaaccgttggttgaagaggtagagaagagaaatagattgaagattttgttacca
tacttggaaaagactttggaaggtggctccaatgatcaagaagtttacaatgctttagcc
aagatttacattgattcaaacaactcacccgagaagtttttgcaagaaaataacaattat
gatactttgaccgttggtaaatattgtgaaaagagagacccatatttggcttacatctgt
tacgccaaaggtggcaatgatgatgccttgattgaagttacaaatgaaaacaagatgtac
aagtaccaagccagatacttgttgcaaaaatctgatcttgatttatggaacaaagttctt
tcatccgacaatgttcacagaagacaattggttgatcaagttatttccactggtattcct
gagttggatgatcctgaaccaatttcaatcacggttaaggcattcatggagaatgaattg
cctgaagagttgatggaattattggaaaagatcattttagaaccatctccatttagtgaa
aatgcctcgttacaaggattgatgattttgactgctatcaaagctgatccatccaaggtt
tccaactacatcgaaaagctcgataaatttgacccccttgaaattgcacctttgtgtatc
gataacggcctcaacgaagaagcctttgaagcttatgataaatttgaattgagaaccgaa
gcaatgaaggtattgattgaagacattgtttctcttgacagagcagaacaatacgctgaa
aaatatgacacatcagaattatggtatcaactcggtactgctcaattggatggattgcgt
attccagaggctattgactcttatgtcaaatccaagaacccagagaattatgctcaagtt
attgaaattgctgaacatgctggaaaagaagaagaattgttaccatttttggaaatggca
agagaaactttgagagagccagttattgatggtgcatttattaatgtttacgcatcattg
gatagattgggtgatatggaaaactttgtttcaggaaccaatgttgctgatttggaagct
attggtgataaactattcgaagctaaaaactacaaagcagcaaagattttgtatagtaat
gtttccaaatactccaaacttgctacaacattggtttatcttggtgattatcaagctgct
gttgattgtgctagaaaagcttccaacactgaagtttggaaacaagttaacaacgcttgt
attgaaaataaggaattcagattggcacaaatttgtggtttgaacttaattattgatgcc
gaagaattaccagaattggtcaagacttatgaatacaatggatactttagtgaattgatt
gctttgtttgaaagcggtttaggtttggaaagagcacacaagggtatgtttacagaattg
gctattctttactccaagtacagtcctgaaaaagttatggaacacttgaaattgttttgg
tcaagaattaatatccctaaagttattactgcttgtgaagaagctcatttgtatcctgaa
ttgattttcctttattgccattatgaagaatgggataatgctgcattaacaatgattgat
aaatctgaagttgcatttgatcattcatcattcaaggagattgttgttaaagcccccaac
ttggaaatttattacaaggctatccaattttatattaatgaacaaccttcattgcttgtc
gatttgttgctggttttatcaccaagattggatttacctagagttgttagaatgtttgtc
aagagtgataaccttccattgattaaaccatttttagtttcagtgttggataagaacaat
agagttgtgaatgatgcatatcattcattattgatagaagaacaagatcacaaggctttg
agagatgctattcattcttatgatagatttgatcaaattgatttagctgaaagattggag
aaccattcacttgtttacttcagacaaatttcagcattgcttttcgccaaaaacaagaag
ttcaacaagtcaatttctatattgaaaaaagatggtgattgggtcaatttattgaaagtt
gcttctggatcaaaccaaaaagttgtgcatgaagtactagactactttgtatccactggt
aattatgaagctttagtggcattgttgtatacatgttatcatcttattgattcaacttat
gttgctgaaattgcatttgaataccaattgggtaattttgttgctccatataagatttat
aaagatcatgttagggaacaacaattgattgaattgttcaagagacttccaagtaaagaa
gaagagacggaagagaatgaacaaccaaagtttatgcttacatattag
DBGET
integrated database retrieval system