Candida orthopsilosis: CORT_0F03940
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Entry
CORT_0F03940 CDS
T02488
Name
(RefSeq) Mms4 protein
KO
K10882
crossover junction endonuclease EME1 [EC:3.1.22.-]
Organism
cot
Candida orthopsilosis
Pathway
cot03440
Homologous recombination
cot03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
cot00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
CORT_0F03940
03460 Fanconi anemia pathway
CORT_0F03940
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cot03400
]
CORT_0F03940
DNA repair and recombination proteins [BR:
cot03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
CORT_0F03940
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC4
Caprin-1_dimer
Motif
Other DBs
NCBI-GeneID:
14541734
NCBI-ProteinID:
XP_003870746
UniProt:
H8X9F2
LinkDB
All DBs
Position
6:complement(835168..838290)
Genome browser
AA seq
1040 aa
AA seq
DB search
MDGTIQAKQDPDTASDVSHPPPHQANTNQQNPYPDANISLNQQLPTVSTNQSIRTCSSSQ
QYAHSHSNAPLTFNDSSPIEGMHSFLNHPPGRRRSPYMHLNDLNQPLPPIGSSPGDDPYA
SIPPARRPQNNLVRNGFTSSSPVVNIHIHSSIYVNGSSPSNQYQQSSTGSFHNTTPFSFQ
HQTENRVDLQSSAFQGPSRPSNNIQFSSKRSFDMSSGGPHEPQLFVNSASSTPSQNKANW
APRGYNENTHHSSPSTANYSSPQVQELPSLTPTHSQSPALNQINRLPSSPFATGSNRPPN
STTKSSSVPIATPKTSKRKFKMSMDDLESTFRSWSGAPKPRTRSGDLGEEQKFITAEKKP
EMVIVNTNTQNSKLTTYQECNTNTVGTSAPNSTYSELKIHNPPLSKPTSHTTPAVEPNTI
EKEPEMVTTRTSTQDTKPAFVQVSNSQAIGLSATNSSLPKSSTVQNVKPIVIELSDDDSE
VEATKPFSVAPETSIIVIGSDDEDEAGPIAPTNNSKHEKAMNTSLISSPISVKPRFDFKN
ISDSITDSSFSFTKVDTKHAVAPEAKKPPKLGHNTPVQESKDFSDDNPFDLPPQPAFIQW
LSSDEEDYAKDIALGTRTTTSSIVKNKADPIVSESLPIHKDVSNTRTVGMPVSLTNRSTG
NLNYQKTGIASRSKSVSSARFSRPATEISLKPVKRASTTQDGESSTAKKAKKSKTDSLLA
ELPKIDNFEYSYKELQEANRVNRKKEELHAEMEIYISMKPYNVLKEFTEEFKSKVATFES
ELPLVYWNRNAKAEYIKEKDYFIPTAAKKVVQQTFVMYYLAQDFLDKLHSNKLKNDVLKG
TEEMCKISTHKYHVILLVEGYDQLINKIKSYKQRQFRSQVLNGEEQSKKKKDDEQMSKFP
EPIEIAKLFNRAQLDLKVNIFPVRSRQEGVMWLNSFTYTIGSALYDKYERNQGLANLGVV
RSGSDTKATFLQSIQHFPRMTHSKAQILQSSHGSMYSIYSKFCTSGTLGKDTLGRNIVPP
SVDSTMLNFFTSDDPDKAIT
NT seq
3123 nt
NT seq
+upstream
nt +downstream
nt
atggatgggacaatccaagcaaaacaagatcccgacaccgcgtctgatgtgtctcatccc
cctccacatcaagctaacacaaatcaacaaaacccttatcctgatgcaaatatatcgttg
aaccaacaactaccgacggtgtcaacaaatcaatccatacggacttgtctgagcctgcaa
caatatgcccactcgcatagtaatgcacccctcactttcaacgatagctcaccaattgaa
ggtatgcatctgtttttaaatcaccctccaggcaggaggcgatccccttatatgcatctt
aatgatttgaatcaaccgttacccccaataggctcatctcctggggatgatccatatgca
agcataccacccgcacgccgacctcaaaacaatttggttcgcaatggctttaccagctca
tcgccagtagtgaatatacatatacacagctcaatatatgtcaatggttcatcaccatcg
aatcaataccagcaatcaagtactggtagtttccataatacgacacccttttcatttcaa
catcaaacagaaaacagagttgatttacaaagtagcgcatttcaagggccatcacgcccg
tccaataacattcagttttcatccaagcgaagttttgacatgtcatctggtggcccacat
gaacctcaattgtttgtcaatagcgcgtcgagcacgccgagccaaaataaagctaattgg
gcacctagaggctacaatgagaacacgcaccactcaagtcccagtacggcaaattattca
tccccacaagtacaagagcttccaagtttgactccaacgcacagccaatctccagcgttg
aatcaaatcaatagattaccaagtagtccgttcgccacgggaagtaacaggccgccaaat
tctactaccaagagctcttcagtgcctattgcaactcctaaaactctgaagagaaaattc
aaaatgtcaatggacgatttagagagcactttccgaagctggagtggagcccctaagccg
agaacacggagtggagatcttggcgaggaacagaaatttattacagctgagaagaaaccg
gagatggttatcgtaaacaccaatacacaaaattcaaagcttactacttatcaagaatgc
aatacgaatacagttgggacatcagctccaaattcgacctatagtgaattgaagatacac
aacccgcccttatcaaaaccaaccagccataccacccctgccgtagagcctaatacgatt
gaaaaggaaccggaaatggttactacaagaacttcgacacaagacactaaacccgcattt
gttcaagtaagcaatctgcaagcaataggtctactggccaccaattcatccttacctaag
tcatcaactgtacaaaatgtgaaaccaattgtaattgagctatcagacgatgattcagaa
gtggaggctacaaaaccttttctggtagcaccagagacttcaataattgttatcggaagc
gatgatgaggatgaagctgggccaattgcacctacaaataattccaagcatgaaaaagca
atgaacacatcgttgatatcatcacctatactggtgaaacctaggtttgatttcaaaaac
atctcagactcaattaccgactcttccttttcgttcacaaaggttgataccaaacacgct
gtagctccggaagccaaaaagcctccaaaacttggccacaacaccccagttcaagaatcc
aaagattttctggatgataacccatttgacttacctccccagccagcgtttattcaatgg
ctaagttctgatgaagaggactatgccaaagatatcgctctaggtacaaggacaactaca
agtagtattgtcaaaaataaagcagatccaatagtatcagaatcgttgcctatccataag
gacgtaagcaacacaaggaccgtgggaatgccagtctcgttgaccaacagatctactggt
aacttaaattatcaaaagactggcattgcaagcagatctaaatctgtactgagtgcccga
ttttccaggccggctactgagatttccttgaaaccagtgaagcgagctagcacaacccaa
gatggagagagctctacagcaaagaaagcaaaaaagtctaaaactgatagcttgcttgca
gaattacctaaaattgacaattttgagtatagctataaggagttacaggaagccaatcga
gtgaatagaaagaaagaggagttacatgcagagatggagatttatatcagcatgaaacct
tacaacgtcttgaaagagttcacagaagaatttaagctgaaagttgcaacttttgaactg
gagttgcctttagtgtactggaacagaaacgccaaggcggagtacatcaaagagaaggat
tactttattcccactgcggcaaagaaagtggtacaacaaacgtttgtcatgtactatttg
gcccaagattttttagacaagctacattcaaataaactcaaaaatgatgtgttgaaagga
actgaagaaatgtgtaagatttcgacccacaagtatcacgtgattcttttagttgaagga
tatgatcaattaattaacaagataaaatcatacaagcaaagacagttccggtcacaagtc
ttaaatggcgaagaacaatcaaagaaaaagaaagatgatgagcaaatgtcaaaatttcct
gaaccgattgagattgcaaagttgtttaatagagctcaattagatttaaaggttaacatt
tttccagttcgttctcgacaagaaggtgtaatgtggttgaactctttcacttacaccatt
ggatcagctttatatgacaagtatgagagaaatcaaggattagcaaacttgggagttgtt
agatcgggtagtgataccaaagcaacttttttgcaatcaattcaacatttcccacgtatg
acgcattcaaaggcccaaatattacaatcttctcatggatccatgtatctgatctattct
aaattttgtacatcgggtacattgggtaaagatacgcttggaagaaacattgtacctcca
tcagttgattcaacaatgttgaacttttttacatcggatgaccctgacaaggcaatcaca
tga
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