Lodderomyces orthopsilosis: CORT_0F04510
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Entry
CORT_0F04510 CDS
T02488
Name
(RefSeq) Dia4 protein
KO
K01875
seryl-tRNA synthetase [EC:
6.1.1.11
]
Organism
cot
Lodderomyces orthopsilosis
Pathway
cot00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
cot00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
CORT_0F04510
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
cot01007
]
CORT_0F04510
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cot03016
]
CORT_0F04510
Enzymes [BR:
cot01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.11 serine---tRNA ligase
CORT_0F04510
Amino acid related enzymes [BR:
cot01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
CORT_0F04510
Transfer RNA biogenesis [BR:
cot03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
CORT_0F04510
Prokaryotic type
CORT_0F04510
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_2b
Seryl_tRNA_N
Mod_r
GAS
KIF21A
tRNA-synt_His
DUF7310
NET2A_C
DUF3450
FmiP_Thoc5
DYAD_CC
CENP-F_leu_zip
DUF2408
ATG16
DUF1664
LXG
PEA2_C
Spectrin
DUF7121
Mua
Rod_CreS
Snapin_Pallidin
DUF724
DUF641
Cluap1
FlaC_arch
SCD2_helical_N
FliT
Cep57_CLD_2
BLOC1_2
ANG-1
Prominin
DUF5660
DUF5775
KASH_CCD
Motif
Other DBs
NCBI-GeneID:
14541601
NCBI-ProteinID:
XP_003870803
UniProt:
H8X9K9
LinkDB
All DBs
Position
6:981697..983262
Genome browser
AA seq
521 aa
AA seq
DB search
MIIYGFCNKEYTKKVFGLSLLTFGRILLVATTCSVKHFFETCRAKNFAIEKLIDIASHLM
LPSVGSRKSLLRFASTAAKNTSILLRAQLDLNDVVLRSPEYKESITRRQLSKNLIEDVDF
IVKNRPIQSQTYTKINALKRERTELAEKIQKKEPNLDEVKARLSEIKSEIKPLEKYVKEL
QEEIYSKAEALPNLLDPAVPASEIKEELVQYINTSAEEVGKYVGPDTSKDHKIIGERFGL
FDFETASRISGPSWYYLLGDGALLEQALVQYALSKARRHGYKMVIPPSIVRSEVVHACGF
KPNDQNNEKQIYQIEDEPRSLTGTAEIPLGALHSSTIFPSNTKFPIKYSGVSRSYRAEAG
ASGKDTKGLYRVHEFTKVELFHFTTLERARDELESVKNFQLEIIEELDLKARLLNMPTSD
LGAPAMKKYDIEAWMPGRGSWGELTSCSNCGDYQSRRLGIRFNGKGDKVAHVATLNGTCM
AVPRVIVAIIEQNYDQENDVIRIPKVLVPFMDGRNVISKIE
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atgattatttatggcttttgtaataaagagtatacaaagaaggtttttggtttactgctt
ctcacttttggccgaatcttgttagtagcgacgacatgcagtgtcaaacattttttcgaa
acctgtcgcgcaaaaaactttgcaattgagaagttgatagatatagcttctcacctaatg
cttccctcagtaggatcacgcaaatcgttactcaggtttgctagtaccgcagccaagaat
acatcaatacttctccgagctcaattggatttaaacgatgtcgtattgcgatctccagag
tacaaggaatccatcactaggcgccaactactgaagaatttgatagaagatgtggatttc
attgtcaagaatcgacctattcaatcgcagacttacaccaaaatcaatgctttgaaaaga
gaaagaacagaactagcagagaagatccaaaaaaaggagcccaatcttgacgaagttaaa
gccagattaagcgaaattaaaagtgaaatcaagccattggaaaaatatgtcaaagaacta
caagaggaaatatacagcaaggcagaggctttacccaatttacttgaccctgcagttcct
gcaagtgaaattaaggaagagttggtgcaatatatcaacacctctgcagaagaggttggc
aagtacgttggccctgatacatccaaagatcacaagattattggtgagagatttggttta
tttgattttgagacagcatcaaggatatcaggaccctcgtggtactatttattgggcgat
ggtgctttacttgaacaagctttggtgcagtatgcgttatcaaaagcacgtcgacatggc
tacaaaatggttattcctccttcaattgtaaggtccgaagtagtacatgcttgtggcttc
aagccaaacgatcagaataacgaaaagcaaatctaccaaattgaggatgagccaaggtcg
ttgacaggaaccgccgagattcctttgggggcacttcattcttctactattttcccatca
aacacaaaatttccaattaagtattcaggagtatcgaggtcgtatagagcagaagctggg
gctagcgggaaagatacaaaagggttgtatagagttcacgagttcactaaggttgagctc
tttcactttacaacgttagagagagctagagacgagcttgaaagtgtcaagaactttcaa
cttgaaatcattgaggagttggatttaaaagctcgcttgttaaatatgccaacatcagac
ttgggggccccagctatgaaaaagtatgacattgaagcttggatgcctggaagaggttca
tggggagaattgacgagttgttccaattgtggagactaccaatcgagaagactcggtatc
cgcttcaacggaaagggtgacaaagtcgcccacgtggccacgttgaatggaacctgtatg
gctgtaccaagagtcattgttgcaattattgaacaaaattatgatcaagagaatgacgtg
atacgaattccgaaagtgttggtgccattcatggatggaagaaacgttataagtaaaatt
gaatag
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