Candida orthopsilosis: CORT_0G02940
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Entry
CORT_0G02940 CDS
T02488
Name
(RefSeq) hypothetical protein
KO
K12623
U6 snRNA-associated Sm-like protein LSm4
Organism
cot
Candida orthopsilosis
Pathway
cot03018
RNA degradation
cot03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cot00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
CORT_0G02940
09123 Folding, sorting and degradation
03018 RNA degradation
CORT_0G02940
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cot03019
]
CORT_0G02940
03041 Spliceosome [BR:
cot03041
]
CORT_0G02940
Messenger RNA biogenesis [BR:
cot03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
CORT_0G02940
mRNA degradation factors
5'-3' decay
Lsm complex
CORT_0G02940
Spliceosome [BR:
cot03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
CORT_0G02940
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
14542157
NCBI-ProteinID:
XP_003871097
UniProt:
H8X9Z5
LinkDB
All DBs
Position
7:596497..596964
Genome browser
AA seq
155 aa
AA seq
DB search
MLPLYLLTAAKNQPILVELKTGETYNGNLTNCDSWMNLTLHEVIQTNADGDEFAKLPEIY
IKGMHIKYLRIPDQIIDHVKEQQQLYHQQQQHHHGHGGQDNRNRYVKRRGDSGGRDNNRD
NNRDAGGRNGGGRNNRDGGRGGRGGQGGNRPNNNR
NT seq
468 nt
NT seq
+upstream
nt +downstream
nt
atgcttccattgtaccttttaacagcagcaaaaaaccaacccatcctagttgaattaaaa
acaggagaaacatacaatggaaatctaaccaattgtgattcatggatgaatctaacatta
cacgaagtaatccaaaccaatgccgatggcgatgaatttgccaagttgcccgaaatatat
attaaaggaatgcacatcaaatatttgcgcatacctgatcaaatcattgatcatgtcaaa
gaacaacaacaattgtatcatcaacaacagcaacaccatcacggacatggtggacaggac
aatagaaacaggtacgttaagagaagaggagattctggtggaagagataataatagagac
aataatcgagatgctggtggaagaaatggtggtggtaggaacaatagagatggtggtaga
ggaggtagagggggacaaggtggtaatagaccaaataataatcgttga
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