Candida orthopsilosis: CORT_0H00140
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Entry
CORT_0H00140 CDS
T02488
Name
(RefSeq) Rad3 protein
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
cot
Candida orthopsilosis
Pathway
cot03022
Basal transcription factors
cot03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cot00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
CORT_0H00140
09124 Replication and repair
03420 Nucleotide excision repair
CORT_0H00140
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cot03021
]
CORT_0H00140
03036 Chromosome and associated proteins [BR:
cot03036
]
CORT_0H00140
03400 DNA repair and recombination proteins [BR:
cot03400
]
CORT_0H00140
Enzymes [BR:
cot01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
CORT_0H00140
Transcription machinery [BR:
cot03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
CORT_0H00140
Chromosome and associated proteins [BR:
cot03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
CORT_0H00140
DNA repair and recombination proteins [BR:
cot03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
CORT_0H00140
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HBB
DEAD_2
Helicase_C_2
DEAD
ResIII
PspAA
YtxC
Motif
Other DBs
NCBI-GeneID:
14542351
NCBI-ProteinID:
XP_003871257
UniProt:
H8XBE4
LinkDB
All DBs
Position
8:complement(3284..5662)
Genome browser
AA seq
792 aa
AA seq
DB search
MKFYIDDLPVLFPYPRIYPEQYAYMSDIKKTLDVGGNCILEMPSGTGKTISLLSLTVAYQ
MHYPEHRKIVYCSRTMSEIEKALIELHKLMEFRASELGYVEDFRGLGLTSRKNLCLNPLI
SREKKGNVVDEMCRRVTNGQLKEKIEKGVVTEEDQVRDPAKYSLCSYHEKLYDLDPHELV
PSGVYSFDALIRYCKEMGTCPYFTVRRMIPFCNIIIYSYHYLLDPKIADRVSRELSKDSI
IIFDEAHNIDNVCIESLSLDLTEDVLKRATRGANKLAEAVEDMKAKDSEKLQNEYEQLVD
GLRQAEVEREQEMFMSNPILPQDLLDEAIPGNIRKGEHFIAFLKRFIEYLKTRMKVLHVI
SETPTSFLQHLKELTYIDKKPLKFCSERLSLLVKTLELTEIEDFNALKDIATFATLVSTY
DTGFQLILEPFETEGSTVPNPMLHFTCLDASIAIKPVFERFSSVIITSGTISPLDMYPKM
LNFQTVIQESYAMTLARRSFLPMIVTKGSDQVSISSRFEIRNDPSVVRNYGSLLIEFAKI
TPDGMVVFFPSYLYMESIISMWQTMGVLDEVWKHKLILVETPDAQETSLALETYRKACSN
GRGAVLLSVARGKVSEGIDFDHHYGRTVLMIGIPFQYTESRILKARLEFMRDHFQIKEND
FLSFDAMRHAAQCLGRVLRGKDDYGIMVLADRRFARKKAQLPKWIAQALNDSDTNLSTDM
ALATAKKFLRSLAQPTNPKDQEGVSVWDIDQLEAYQKQYNQGRIKEEVEENGKVEEVGDE
FIDIDDEDIDLL
NT seq
2379 nt
NT seq
+upstream
nt +downstream
nt
atgaagttctacatcgatgatctacctgtattgtttccttacccaaggatctatcccgag
caatatgcttatatgagtgatatcaagaaaacgctcgatgttggaggaaactgtatacta
gagatgccttcgggaacaggcaaaactatttcattattgtcgttgacagtggcgtatcaa
atgcactatccagaacacagaaagattgtatactgctcgcgtactatgtcagagattgaa
aaggctttgattgagttgcacaagttgatggagtttagagcaagcgagttgggatacgtt
gaggatttcagggggttgggattgaccagtagaaagaacttatgtttgaacccgttgata
tcgagggagaagaagggtaatgtggtggatgaaatgtgtcgacgtgtgacaaatggacag
ttgaaggaaaagattgaaaagggtgttgtcacagaagaagaccaagtgagggatccagca
aagtatagtctatgctcctaccatgaaaaattgtacgatttggatccccatgagttagtc
ccactgggtgtttactcatttgacgcgttgatcaggtactgtaaagagatgggaacgtgt
ccgtatttcactgttcgtagaatgattccattctgcaacattattatttattcataccat
tatttattggatcctaaaattgctgatcgagtatcgcgagaattgtcaaaggatagtata
attatatttgatgaggcacataatatcgataacgtttgtattgagtcgttatcgttggac
ttgactgaggatgtgttgaagcgagccacgcgaggggcaaacaaattggcagaggcagtt
gaagatatgaaggcaaaagatagtgaaaaattacaaaacgaatatgaacagttggtagat
gggttgcgtcaagctgaggttgaaagagagcaggaaatgtttatgtcgaatccaattcta
ccgcaagatttattagacgaagcaattccaggtaacatcagaaagggcgagcatttcatt
gcatttttaaagagatttattgaatatttaaagacaaggatgaaggttttgcatgttatt
agtgaaacgccaaccagtttcttacagcatttgaaggagttgacttatattgataaaaaa
ccattgaagttttgttcagaaagattgtctttgttggtgaaaacgttggagcttacggag
attgaggactttaatgctttgaaggatattgctactttcgccactttggtgtctacgtat
gacactggatttcagttgattttggaaccattcgaaacggagggaagtacggtgcctaat
cctatgctacattttacttgtcttgatgcttctatcgctataaagccggtatttgaaagg
ttttcttcagtgattatcacgtccggtactatctctcccttggatatgtatccgaaaatg
ttgaattttcaaactgttatacaagagtcgtacgcaatgactttggctaggaggtctttc
ttgccaatgattgtgaccaaaggctctgaccaagtatccatatcttcaagatttgaaatc
agaaatgatccctcggttgtgagaaactacggttctcttttgatagagtttgccaaaatt
acccctgacggtatggtggtgttctttccatcatatctatatatggagtcgattatttcc
atgtggcagacaatgggtgtcttagacgaggtgtggaagcataagcttatcttggtcgaa
actcctgatgctcaggaaacctcgttggcattggaaacgtatagaaaagcttgttcaaac
gggaggggagcagttttattgtccgttgcgcgtggaaaggtttctgaaggaattgatttt
gatcatcattatggaagaacagtattgatgattggtatccccttccaatatacggaatca
aggatattaaaggccaggttggaatttatgagagatcattttcaaatcaaagagaatgat
ttcctctctttcgatgcaatgcgacacgctgctcaatgcttgggaagagttttgcgaggc
aaagacgattatggtattatggtgttggctgatagacgatttgcaagaaagaaagcgcag
ttgccgaaatggattgctcaggcattgaatgattcagatactaatttgtctacagacatg
gcattggccaccgctaagaagtttttgcggagtttagctcaaccaactaatccaaaggat
caagaaggggtatcggtgtgggacattgatcagcttgaagcatatcagaagcagtacaac
caaggtcgcatcaaagaagaagttgaagagaatggtaaggttgaagaagtgggtgatgag
tttatagatattgatgatgaggatatagatttattatag
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