Candida orthopsilosis: CORT_0H00360
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Entry
CORT_0H00360 CDS
T02488
Name
(RefSeq) Rrp12 protein
KO
K14794
ribosomal RNA-processing protein 12
Organism
cot
Candida orthopsilosis
Brite
KEGG Orthology (KO) [BR:
cot00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cot03009
]
CORT_0H00360
Ribosome biogenesis [BR:
cot03009
]
Eukaryotic type
90S particles
Other 90S particles
CORT_0H00360
Pre-60S particles
Other pre-60S particles
CORT_0H00360
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRP12_HEAT
HEAT_RRP12_N
Motif
Other DBs
NCBI-GeneID:
14542373
NCBI-ProteinID:
XP_003871279
UniProt:
H8XBG6
LinkDB
All DBs
Position
8:complement(45880..49515)
Genome browser
AA seq
1211 aa
AA seq
DB search
MAENNPDGGQSEDVFLLEDKLSKIRSQINSKLDNQKHLAIILSAVEENIDEQKNEKTPVA
YFVSFLSLLDQCIQNEQIVDKNLAATTAYFLDIIFPFTPKPLLKQKFNQVLLKLSQPLNV
EAEAPLVRSTIGAMESLLLAQDSARWLTKGAISPNRAFMALIELSFDPRPKVRRRAQEAV
KNILTNPPPSPSSIHVAAVGASDASLRQLITLLSEYRKQRKSNANKELNSQIIHCLQLIT
IITSANSWPVKNIESLCDSLLEISKTSDQFLVAAAFEAFEGLFKSMTDVIDVEKFTKVLN
IILDLKPSVNDAHLSTSWLTVVAKALESFSILSPFDCIKKLPQVFSAVSEFLGSDSQNIY
SSAAHCLTAIISQTIPEKFLLRPNKEYEITSEVYETVDETITFISEFIENELLTIKYQHA
TGEILKFVSVAIEKLRSRANPDFLNILKVVGNWRTNETDNFPHNKEAEDCIAACVSSMGP
EAVLGVLPMNLTNDGNGPGRAWLLPILRENVRCAELEFFKSQILPTVDFFEAKIGASGNK
ESMNAKIFQTIIDQVWSLLPRFCDLPKDLRSAFDESFATKLSDLMFANVELRTPVCHAWR
VLVQSNVAYRNGESSEDLLLQQEIPREEAAKNIEYLSSIASNILTVLFNVFTYTMPESRG
FVLETIEAYLQIVPSQELAATFDKVCAMLKSALDEEAQNAKNNDSRPDTSVTMMDLIVAM
AKYVPEASHNALFSVFVTTVSLESKPLLQKRSYRIISKLCESEEGKMSIAKYIGEVENKI
IEATEITNQAARPARLTAILLILEILPSTDLYFIPSILQEIIIATKDINERSRGLSYQIL
IKMGQKMNQGGSIENAKVPGFDPNAAPSEASLTEFFTMVSAGLAAQSAHMISATITAIAC
LVFEFKNQLPTETLFEISSTVELFLTHNSREIAKSAIGFVKVEILSLPEEMVRNNLSELL
SKLMKWSHEHKGHFKSKVKHIIERLIRKFGVEEVENAIPEEDKKLVANIKKTRNRAKRKQ
EISPGLQAAANPSSSTKKFVSAYEEALYDSDVSDEEEVDIYDEDANRAKKNKKSNQFILE
TGDEPLNLLDRQSLAHISSSKPKKLTRSELKSKTDEFKTKNGKLVFSESGENDDPFANKS
SGIDAYLDAVKQAPVRGQKNKLKFKKSKGDDDETWSDDEEETKKSVKKSKVLGKSKISKP
TKQRFKAHKKL
NT seq
3636 nt
NT seq
+upstream
nt +downstream
nt
atggctgagaacaatcccgatgggggacagagtgaagacgttttcttgttagaagataag
ctatccaaaattaggagccaaatcaactccaaactagacaaccaaaaacatttagcgatt
attttatcagcagttgaggagaatattgacgaacaaaagaatgaaaagacaccagtggca
tactttgtctcctttttatcgttactcgatcaatgtatccaaaatgaacaaatagttgat
aagaacttggctgccactactgcctattttctcgatattatattcccgttcacccctaaa
ccattattgaaacaaaagtttaatcaggtgttattaaagttgtcacaaccattgaatgtt
gaagccgaggctccgcttgtgaggtcgactattggggctatggaaagcttgcttttagct
caagatagtgctcgttggttaacgaaaggcgctatttctccaaatagagcatttatggcg
ttgattgaattgtcatttgatcctaggcccaaggtaagaagaagagcacaggaggcagtg
aagaatattttaacaaacccaccaccaagtccaagttctatccatgtggctgctgtggga
gcctccgatgcatcattgaggcaacttatcacacttttgtcagaatacagaaaacagaga
aagagtaatgccaacaaagagctcaattcacaaatcattcattgcttgcaacttataacg
ataataacttcagctaactcctggccagtaaagaatattgaaagtttatgtgattcgctt
ttggaaatctcgaaaacttcagatcaattcttggttgcagcagcattcgaagcatttgaa
ggacttttcaagtccatgactgatgtgattgacgttgaaaaattcaccaaggtattaaat
attatattagatctcaaaccaagtgtcaatgatgcgcatttgagtacttcgtggttgact
gtggtagcaaaggctttagagagcttcagcattttatcaccatttgattgtataaagaag
ttacctcaagttttttctgcagttagtgaatttttgggttctgactcccaaaatatttac
tctagcgcagcacattgtttgacagcaatcatatcacaaactataccagaaaagtttctt
ttgcgaccaaataaagaatacgaaattactctggaagtttatgaaactgttgacgaaacc
atcactttcatttccgagtttattgaaaatgagttgttgacgataaagtatcaacatgcc
actggtgaaatattgaaatttgtttccgtcgctattgagaaactccgctcaagagcaaac
ccagactttttaaacattttgaaagttgttggtaattggagaacaaatgagactgataat
ttccctcataataaggaagccgaggattgcattgctgcgtgtgtatcatccatgggacca
gaagctgttttaggtgttttgccaatgaatttgaccaatgatggaaatggacctggtaga
gcttggttgttgcctattcttagagaaaatgtccgttgtgcagagttggagtttttcaag
agtcaaattttaccaactgtcgatttcttcgaagccaagattggagcttctggtaacaaa
gagtcaatgaatgctaaaatttttcaaacaattattgatcaagtttggtctttgttaccc
cgtttctgtgacttaccaaaagatcttaggtcagcgtttgatgagagttttgctacaaag
ttgtccgatttgatgtttgccaatgttgaattgagaactccggtttgccatgcttggaga
gtgcttgtgcaatctaacgtagcttaccgcaatggggaatcaagcgaagatttgttattg
caacaagaaattcctagagaagaggcagccaagaatattgaatatttgagctcaattgca
tcaaacatattgactgttttgtttaatgtatttacctataccatgccggaatcaagaggt
tttgttttggaaactattgaagcctatttgcaaatcgtaccatctcaagaactcgcggca
acttttgataaagtgtgtgctatgttaaagagcgcattggatgaagaggctcaaaatgca
aaaaacaacgactccaggccggatactagtgtaaccatgatggatttgattgttgccatg
gccaagtatgtgccagaagcatcacataatgcccttttctccgtattcgtcactacagta
tccttagaatcaaagcccttgctacagaaaagatcttataggataatttcaaaattgtgc
gagtctgaagaaggtaagatgtcaatcgcaaaatacattggggaagttgaaaacaagata
atcgaagcaacggaaatcactaatcaagcggcaagaccagcaagattgactgcaatttta
ttaatattggagatacttccatctacagatttatactttattccatcaattttgcaggaa
atcatcattgctacgaaggacatcaatgaaagatcaagaggtttgtcttaccaaatattg
atcaagatgggacagaaaatgaaccaaggtggatcgattgaaaatgcaaaagtacctggt
tttgatccaaatgcagcacctagtgaggcttctttgactgaatttttcaccatggtaagt
gctggtttggcagcacaaagtgcccacatgatttctgcgacaattactgccatcgcatgt
ttagtatttgagtttaaaaatcaattgccgacagagacccttttcgagatttcttcgact
gttgaattgtttttgacacataattcaagggaaatagctaaatctgctattgggttcgtc
aaagtggaaattttgtcattgcctgaggagatggtgagaaacaatttgagtgaacttttg
agtaagttgatgaaatggtcacatgagcataaaggacatttcaaaagtaaagtcaagcac
attatagaaagacttattagaaaatttggggtagaagaagttgaaaatgcaatacctgag
gaagacaagaagttggttgccaatatcaaaaagactagaaacagagccaagagaaagcaa
gagattagtcctggattgcaagctgccgccaacccatcttctagtaccaagaaatttgtt
tcggcctacgaggaggcactctatgattctgatgtgtcagacgaagaagaagttgacata
tacgatgaggacgccaatagggccaaaaagaataagaaatctaaccagttcatcttggaa
acaggcgatgaaccacttaacttgttggaccgtcaatctttggcacatatctcctcatcc
aagccaaagaaactcactagatcagagctcaaatcaaagactgatgaattcaagacaaag
aatggtaaattagtgtttagtgaaagtggtgaaaatgacgatccatttgccaacaaaagc
tccggtatcgacgcatatttggatgctgtcaagcaagctccagtacggggtcaaaagaac
aaattgaaattcaaaaagtccaagggtgatgatgacgagacttggtcagatgatgaagaa
gaaactaagaagtcagtgaaaaaatcaaaggttcttggaaagtcaaagatttcaaaacct
actaagcagagatttaaagctcacaagaagctttga
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