Candida orthopsilosis: CORT_0H00990
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Entry
CORT_0H00990 CDS
T02488
Name
(RefSeq) Smc6 structural maintenance of chromosomes (SMC) protein
KO
K22804
structural maintenance of chromosomes protein 6
Organism
cot
Candida orthopsilosis
Brite
KEGG Orthology (KO) [BR:
cot00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cot03400
]
CORT_0H00990
DNA repair and recombination proteins [BR:
cot03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
SMC5-SMC6 complex
CORT_0H00990
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SMC_N
AAA_15
AAA_21
SMC_hinge
AAA_29
ABC_tran
Motif
Other DBs
NCBI-GeneID:
14542512
NCBI-ProteinID:
XP_003871340
UniProt:
H8XAW7
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All DBs
Position
8:join(181284..181331,181392..184658)
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AA seq
1104 aa
AA seq
DB search
MSATSMKRSLDDGFTNESNVIPSQQLMASMTQPRKKRAMMTQVYDEGDEENSASASESDE
SDESDTEEYPGDDGLSPAQAGIIEHLSLRNFMCHDSFELNLGPQINFIIGRNGSGKSAIL
TGISVGLGAKANDTNRGSSIRDLIKDGKTTSRIILTLKNEGPMAYKPEEFGKKIIVERKL
QRTGSNTYAIKDENGKTVSQKKSVLDEILFKFNITVDNPLAFLSQDKAREFLTTATAKTK
FEYFMAGAYITDIYNNLDETHRNIWDISSKKDQAEKYTQACKAEYKRIAQIHNAHRRNDH
LRNHAKTLTGKIYWFNVQNLENKIEEYNGRIAEAESKLDTNTQTIQHIEQEIISEQRQEE
KLREELKVAEAGLESEMRRYEEAKEMRSQIKSQREMVKDDIEKNNKEIYKLNENIKYNQG
KLKKERKKIEEQEGGSKEEIRTKLAEADEQLFKSEENMAICRQKTKNLQSNPDPRLDELT
SARDSSSRNLRELRTRQSELEKEQFSRYTPWDARKMQGVMRDIERSQWQSKPLGPLGSYI
SVKKEFQNWKPLLDAILSKSLDAFIVRDERDRAQLDRILRQHHAYHNIIVRKTERYHYES
GKARGTTVLDMLNVSEEAVLYALIDNSSIEKLVIANSAEEARKLCYESNVYGALVQFGNS
SGSRVSRQNGVLRSDPVYYSGKLPRFGTENKNELLDELKEEINNETQNQHSIERELRSLK
MKIDGEREALYREQNELKRHVEGLRRKKAIYEDKIDKEIDESNILKLQLRIEEDTTQIGR
LEGVIESLEESFERTSEKFNECIQSVTEIKEAVREKGDEKRRAETRLVTHEEYIKRLRQQ
IVELQERKHEFVSTIEKSKVKIERGKARLEEQLQMAQNSCSRDEITITEEDTQESIADEY
AQIQREIKDAEQVLGSTLEDVLKELEVAEKKRDQALASENELDKLTRQMREEIAIRIEFF
LITIKHAVFSAQRSFEDSMEVRGFKGKLNMDFNERTLELMVKTKRDDKNRTVESLSGGEK
SYTQIALLLSIWRTMNSRIRGLDEFDVYMDSVNRSISIKLLLHELSRYPKSQNIFITPQD
IAVVGDLSGDNVRIHKMSDPRRDN
NT seq
3315 nt
NT seq
+upstream
nt +downstream
nt
atgctggctacatcaatgaaaagatcacttgatgatgggtttacgaatgaaagcaatgtg
ataccttcacaacaactaatggcctccatgactcaaccacgtaaaaaacgtgctatgatg
actcaagtttatgacgaaggagacgaagagaattctgctctggcgtcagaatcagacgaa
tcagatgagtcagacacagaggaatatcctggtgatgatggactatcaccagctcaagct
ggtattattgaacatttgagtttaagaaacttcatgtgtcatgattcatttgaattgaac
ttgggtccacaaatcaacttcatcataggtagaaatggatctggtaaaagcgcaattctt
actggaatctccgttgggttgggtgctaaagcaaatgacacgaacagaggctcctccata
agagatttgataaaagatggtaaaaccacgtcacgaataattctcactttgaaaaatgaa
ggtcccatggcatacaaaccggaagaatttggtaaaaaaattattgttgaaagaaaattg
caaagaactggaagtaatacatatgcaattaaagatgagaatgggaaaaccgtatcacaa
aagaagtcggtattggatgaaattttgttcaagtttaacatcactgtggataatccccta
gctttcttgtctcaagataaagcacgagaatttttaaccacagcaacagcaaaaacaaag
tttgagtatttcatggcaggtgcttatatcactgatatttacaacaatcttgatgaaacg
cacaggaatatatgggatatcagtagtaaaaaagatcaggcagagaagtacactcaggca
tgcaaggctgaatataaacgaattgctcaaatacataatgcacatagaagaaatgatcat
ttgagaaaccacgcaaaaactttaactgggaaaatttattggttcaacgttcaaaatttg
gaaaataagattgaagagtataatgggaggatcgcagaagcagaatccaaactagatacg
aatactcagactatacaacatattgagcaagagattattctggagcaacgtcaagaagaa
aagcttcgagaagaattgaaagtagctgaagctggattggaatcagaaatgagacgttat
gaagaggctaaggaaatgaggtctcaaatcaaatcgcaacgtgaaatggtcaaggatgac
atagaaaagaacaataaggaaatttataaattgaatgaaaatataaagtataatcagggt
aagctcaaaaaggagcgaaaaaagattgaagaacaagaagggggctcaaaggaggagatt
cgtactaaattagctgaagcggatgaacaactcttcaagagtgaagaaaatatggccata
tgcagacaaaaaacgaagaacctacagtcgaatccagatcccagacttgatgagttgaca
ctggcaagagactcatcaagtcgtaacttgagagaacttcgcacaagacaatctgaattg
gaaaaagaacagttttcgaggtataccccatgggacgctcgtaagatgcaaggtgttatg
cgtgatattgaacgaagccaatggcaatccaaaccacttggacctttagggagttatatt
tcagtgaagaaggagtttcaaaattggaagccacttttggatgccatattgagtaagagt
ttggatgctttcattgttcgtgatgagcgggatagagcacaattggatagaattctaaga
caacaccatgcgtatcataacattattgttcgtaagactgaacgatatcactatgaaagt
ggtaaggccagaggtacaacagtgttggatatgttgaatgttagtgaggaggctgtattg
tatgcgcttatcgataacagctcaattgagaagttggttattgcaaactcggcagaagaa
gcaagaaaattatgttacgagtcaaatgtttatggggccttggtccaatttggtaactca
tcaggaagtagagtaagtcgtcaaaatggcgtacttaggctggatcctgtctattacctg
ggtaaacttcctagatttggaactgaaaacaagaatgaacttttagatgaattgaaggaa
gagatcaataatgaaacacagaatcaacatagtatcgaacgtgagttgagaagccttaaa
atgaagattgatggtgaacgtgaggcattgtatcgtgaacaaaacgaattaaaacgtcat
gtagaaggcttaagacgtaaaaaagcaatctatgaagacaagatcgataaggaaattgac
gaatcaaatattttgaagttgcaattgagaatagaagaagatactacccaaattggtcga
ctagaaggtgttattgagtctcttgaagaaagctttgaacgaaccagcgagaaatttaat
gaatgtatccaatcagtgactgaaattaaggaagcggttagggagaagggtgatgagaaa
agacgtgcagaaacaagattggtaactcatgaagagtatatcaagaggttgagacagcaa
attgtcgaattgcaagaacgtaaacatgaatttgtttcaaccattgagaaatctaaagtt
aaaattgagcgtggtaaagcaagattggaagaacaattgcaaatggctcaaaattcatgt
agtcgtgatgaaattacgataactgaagaagacactcaagagagtatagctgatgaatac
gctcaaattcaacgagagatcaaagatgctgaacaagttcttggatcaactttagaagat
gtattaaaggaactagaagttgctgaaaagaaacgagatcaagcattggcgagtgaaaat
gaattggataaattaacgagacaaatgcgtgaggaaattgcaatacgtattgagtttttc
ctcattactatcaaacacgctgtatttagtgctcagcgatcatttgaagattcaatggaa
gtcagagggttcaaaggaaaactaaatatggatttcaatgaacgcacgttagaactaatg
gttaaaaccaagagagatgacaagaaccgtactgtggagtcactttcaggtggtgagaaa
tcatacacacagatagctctcttgttgtctatatggcgaactatgaattcaagaattcga
ggattggacgaatttgatgtttatatggattcagttaaccgatccataagtattaaatta
ctccttcatgaattatcaaggtatccgaaatcacaaaatattttcattacacctcaagat
attgctgttgttggtgatttgagtggtgataatgtacgcattcataaaatgtctgatcca
aggcgagataattaa
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