Candida orthopsilosis: CORT_0H01920
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Entry
CORT_0H01920 CDS
T02488
Name
(RefSeq) Caf40 protein
KO
K12606
CCR4-NOT transcription complex subunit 9
Organism
cot
Candida orthopsilosis
Pathway
cot03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cot00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CORT_0H01920
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cot03019
]
CORT_0H01920
Messenger RNA biogenesis [BR:
cot03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
CORT_0H01920
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rcd1
Motif
Other DBs
NCBI-GeneID:
14542272
NCBI-ProteinID:
XP_003871429
UniProt:
H8XB56
LinkDB
All DBs
Position
8:complement(396635..397597)
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AA seq
320 aa
AA seq
DB search
MYSTPPQARALPLSINQPHTDGQQVGSIGNALNDEQIYQWINELVTGTNREKALLELGKK
REQYDDLALVLWNSFGVITVLLEEIISVYPFLDPPNLSASTSNRVCNALALLQCVASNVQ
TRSLFLKANLPLYLYPFLSTNARQRSFEYLRLTSLGVIGALVKNDTPEVINFLLTTEIVP
LCLNIMEISSELSKTVAIFILQKILLDDQGLNYICTTFERFHTVASVLSKMIEQLATLTI
TGANGKPVTGQGQTSSNSSGRLLKHVVRCYMRLSDNLEARKALANILPEPLRDGSFSSIL
QDDIATKRCLAQLLTNINEL
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atgtattcaactcctccacaagcaagagcactcccactatctataaaccaaccacacacc
gatggtcaacaagttggcctgataggaaatgcattaaatgatgaacagatataccaatgg
ataaacgaacttgtcacaggaactaatagagaaaaggcgttactagaattgggtaaaaaa
agagagcaatatgatgatttagctttagtcctttggaattcctttggtgtaattactgtc
ttgttagaagagattattagcgtttatccatttttggatccaccaaatttaagtgcttca
acttcaaatagagtatgcaatgctcttgcattgttgcaatgtgtggcatcaaatgtacaa
acgaggagtttgtttttgaaagctaatttgccgttgtatttatacccattcttatctacc
aatgctcgtcagagatcgtttgaatatttaagattaacaagtttgggagtgattggtgca
ttagtcaagaatgacactccagaagttattaatttccttttaacaacagaaatagtaccc
ttgtgtttgaatataatggaaatttcatcggaattgtccaagactgttgctatatttatt
ttacaaaagatactacttgatgatcaaggcttaaactatatttgtacaacatttgaaagg
ttccacacagttgcttctgtcttgtctaaaatgattgaacaattggctacattaactatt
acaggcgctaatggtaaacctgttacaggacaaggtcaaacgtcgtcgaatagttcagga
aggttattgaaacatgtggtgaggtgttatatgcgactctcagataaccttgaggctaga
aaagcgttagcaaatatcttacctgagccgttgcgtgatggttcattttcatctatttta
caagatgatattgctacaaagagatgtttagctcagttgttgactaacataaatgagttg
taa
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