Corynebacterium pseudotuberculosis Cp162: CP162_02930
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Entry
CP162_02930 CDS
T02154
Name
(GenBank) AAA family ATPase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
cou
Corynebacterium pseudotuberculosis Cp162
Pathway
cou03420
Nucleotide excision repair
cou03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cou00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CP162_02930
03430 Mismatch repair
CP162_02930
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cou03400
]
CP162_02930
Enzymes [BR:
cou01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CP162_02930
DNA repair and recombination proteins [BR:
cou03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CP162_02930
MMR (mismatch excision repair)
Other MMR factors
CP162_02930
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
HRDC
UvrD_C_2
AAA_30
ADDB_N
AAA_11
HHH
DUF6011
Helicase_Sgs1
DZR
Motif
Other DBs
NCBI-ProteinID:
AFM06906
LinkDB
All DBs
Position
604733..606784
Genome browser
AA seq
683 aa
AA seq
DB search
MIDLNELDSDQRAAASAPRGPVAILAGAGTGKTRTITYRIANLIDRGMASPNRVLAVTFT
RRAAGEMRHRLGVMGVGGVQAQTFHSAAMRQLSYFWPQVAGNLPWKLLDNKFPLVGKAAR
SVGIETTTENVRDLLGEIEWAKATLITPDRYVEHVKDRKIPAAADKIAQVYRRYEQAKTT
SEGMLLDFDDLLLHTAGAIENSTAIAEEFREQYRTFVVDEYQDVTPLQQRVLDAWLGERD
DITVVGDANQTIYSFTGATPNYLLGFSRKYPHATVVKLQRDYRSTPQVTDLANTVIGKAR
GRVAGTRLQLEGMRPPGPDPEFCTFDDEPAEARAVASRIKELLNKGVAASEIAVLYRINA
QSAVFEQALADAGIVYQVRGGGEFFQRAEIRQAMSQLVRVAQRTGTESIRGSALETLVRS
SLAPLGLTPEEPEGTQARERWQSLDALAELTVELTQATPDLDIQGLLEQLNQRASAKHPP
TMQGVTLASLHAAKGLEWDAVFLVGLVDGTLPITHALKGGEPHIEEERRLFYVGVTRARE
HLVCSWAKARQEGGRATRKRSRFFDGIVEEPIHAAVPPRTKRSRRCRVCGSPLSTSAENV
MGRCVDCPSGVGDEVFETLKAWRLDMAKEGGVPAYIVFTDATLHAIAEACPTTTDELLKI
SGIGQMKAEKYGSSLLEVLAQFH
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
atgattgatctcaacgagttggatagcgatcaaagggccgccgctagcgccccgcgggga
ccagtagctatcctcgcgggcgcgggtacaggtaagactcgaacgattacctatcgaatt
gccaatcttattgaccgcggcatggctagccccaaccgcgtacttgcagtgacgtttacg
cgtcgcgctgcgggggaaatgcggcaccgactgggagttatgggggtcgggggtgttcag
gcacagacctttcactcagctgcgatgcgacaactatcgtatttttggccgcaagtggcg
gggaatcttccctggaaactgttggataacaagtttccgctcgttggcaaagcagcgcgc
tcggtaggcatagaaacgacgacggaaaacgttagggatcttttaggcgagattgagtgg
gcaaaggctacgttaataacgccggaccgttatgtggagcatgtgaaggatcggaagatt
cccgcggccgcagataaaattgcccaggtatatcgcaggtatgagcaggctaaaacaacg
agtgaaggcatgcttctggattttgatgatcttttattgcacacggcaggggccattgag
aattcgaccgctatcgcagaggaatttcgggagcagtatcgcacttttgtagtcgacgag
taccaggacgttacgcccctgcaacagagagtgctggatgcgtggctcggtgagcgtgac
gatatcactgtggtgggagacgccaatcagactatttattcttttacgggagcaacccct
aattatcttttggggttttctcgtaaataccctcatgcgaccgtagtcaaactacagcga
gattataggtcgaccccccaagtgacggaccttgccaatacggtcattgggaaggctcgg
ggtcgggtagctggtacccggcttcaattggaaggaatgcgccctcccggtccggatccg
gaattctgcacttttgacgatgaaccggctgaggctcgcgccgtagctagtaggattaaa
gaactcttaaacaagggggttgcagcgtcggaaatcgcggtgctttatcgcatcaacgcg
caatcggcggtttttgagcaggcccttgcagatgccgggatcgtttaccaggtgcgtggt
ggcggcgagtttttccagcgcgcggagattcgccaggcaatgtcgcagcttgttcgcgtg
gcccagcgcacgggaacggaatcgatccgaggctctgccctggagaccttggtacgctcg
tcgctagcacctttggggttaaccccggaagagccggaaggaacgcaggctcgcgaacgg
tggcagtccctagatgcccttgcagagctcactgtagagctgactcaagctacaccggat
ttggatatccaaggactcctagaacagctcaatcagcgtgcaagcgcaaagcacccaccg
acgatgcaaggcgtgactttagcgtctctgcatgcggctaaaggcttggaatgggatgcg
gtgttccttgtggggcttgtagacggcacgcttccgatcactcatgcgctcaaaggcggg
gagcctcatattgaagaggaacgcaggcttttctatgtcggcgtcacccgcgcacgggaa
caccttgtgtgctcgtgggcaaaagctcggcaggaaggaggccgtgcaacgcgcaagcga
agccgattttttgacggcatcgtggaagaacctatccatgccgcagtcccgccgcgtacc
aagcgatcacggcgctgccgtgtctgtggctcgcccttgagcacgtccgcagaaaacgtg
atgggaaggtgcgttgattgtccatcgggtgtgggcgatgaggtatttgagactctgaag
gcgtggcgtctagacatggccaaagagggtggcgtacctgcttatatagtctttacagac
gcgaccctgcacgctattgctgaggcctgcccgacgactaccgatgagctactaaaaatt
tcgggcatcgggcagatgaaagcggagaagtatggcagtagcttgctagaagttttggcc
caatttcactga
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